Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 RNA5SP189-201ENST00000364920 115 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC234772.1-201ENST00000377927 937 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 RNU6-657P-201ENST00000383904 107 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 BTF3P8-201ENST00000414577 526 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC068533.1-201ENST00000418542 415 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC245054.1-201ENST00000420944 258 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 OR2B8P-201ENST00000432841 938 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 BX679664.1-201ENST00000434429 253 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC009969.1-201ENST00000438726 172 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AL133162.1-201ENST00000463228 453 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC093267.1-201ENST00000489176 961 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AP004371.1-201ENST00000525240 214 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 DUXAP6-201ENST00000553858 601 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 RN7SL703P-201ENST00000578485 302 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 MIR4666A-201ENST00000580160 79 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 MIR4286-201ENST00000580651 93 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AP001542.2-201ENST00000593141 364 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 VN1R87P-201ENST00000596706 487 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 GAS5-AS1-201ENST00000602767 694 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AL365400.2-201ENST00000605604 902 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AL513477.2-201ENST00000607858 568 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC006249.1-201ENST00000621223 471 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AC007275.1-201ENST00000621243 671 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 RNA5SP196-201ENST00000625967 102 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.16□□□□□ -1.9
COPS3Q9UNS2 AP004289.2-201ENST00000444413 1457 ntBASIC3.16□□□□□ -1.9
COPS3Q9UNS2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
COPS3Q9UNS2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.15□□□□□ -1.9
COPS3Q9UNS2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
COPS3Q9UNS2 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 SNORA7.2-201ENST00000364446 145 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 RNU6-730P-201ENST00000383954 104 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 MIR607-201ENST00000385241 96 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AL035405.1-201ENST00000400795 710 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AL121978.1-201ENST00000402778 359 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 HSPE1P26-201ENST00000405341 275 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AL133264.1-201ENST00000407157 562 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 RNU6-55P-201ENST00000411092 107 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 RN7SKP263-201ENST00000411194 309 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 RNU6-954P-201ENST00000411355 107 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 NDUFB4P5-201ENST00000415445 361 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 C1DP1-201ENST00000426049 402 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC127537.2-201ENST00000439258 465 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 ARF4P4-201ENST00000439608 520 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 MRPL42P4-201ENST00000453267 443 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 VN1R105P-201ENST00000486595 910 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AL139099.1-201ENST00000497398 403 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC020893.1-201ENST00000502452 580 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC026414.1-201ENST00000504046 698 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC016550.1-201ENST00000505348 785 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC023141.12-201ENST00000512399 199 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 RNU2-27P-201ENST00000516185 142 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 MIR2276-201ENST00000516886 89 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC068657.1-201ENST00000520807 306 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AP001636.2-201ENST00000525517 696 ntBASIC3.15□□□□□ -1.91
COPS3Q9UNS2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms