Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AC006480.1-201ENST00000449887 378 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AC098824.1-201ENST00000453565 980 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 CFTRP1-201ENST00000456646 183 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 UBDP1-202ENST00000457888 382 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 SNORD105B-201ENST00000458770 79 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AL024509.2-201ENST00000493462 493 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 KLRA1P-201ENST00000503499 986 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 MTCYBP37-201ENST00000510642 1133 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 HMGN1P15-201ENST00000513870 295 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 snoZ278.1-201ENST00000517059 112 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 SRGNP1-201ENST00000603392 451 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 SNORA62.6-201ENST00000606322 83 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 RNU1-30P-201ENST00000606575 163 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AP005137.2-201ENST00000609238 400 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AC026634.1-201ENST00000634369 198 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 MTND2P41-201ENST00000637599 773 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 ZNF663P-202ENST00000641770 1131 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.67□□□□□ -1.82
SPASTQ9UBP0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPASTQ9UBP0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 RNA5SP235-201ENST00000365411 114 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 RPS7P15-201ENST00000415804 584 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 MTCO3P12-201ENST00000416718 547 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AL035410.1-201ENST00000427409 427 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 MTCYBP32-201ENST00000427945 1084 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 RPL31P54-201ENST00000429803 370 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 TRBV12-2-201ENST00000489763 344 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 SUMO2P20-201ENST00000520803 283 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC019227.1-201ENST00000526902 510 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 MTND5P21-201ENST00000531961 522 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC090877.1-201ENST00000561418 344 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AL133457.1-201ENST00000564251 987 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC010591.1-201ENST00000603941 649 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AL034351.1-201ENST00000605288 668 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC009318.4-201ENST00000620496 486 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 AC091905.1-201ENST00000624400 311 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
SPASTQ9UBP0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.66□□□□□ -1.82
SPASTQ9UBP0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SPASTQ9UBP0 AC111188.2-201ENST00000529697 1387 ntBASIC3.65□□□□□ -1.82
SPASTQ9UBP0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SPASTQ9UBP0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SPASTQ9UBP0 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 RNA5SP258-201ENST00000362750 119 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 RNU6-989P-201ENST00000362756 107 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 RNA5SP72-201ENST00000364442 117 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SPASTQ9UBP0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.65□□□□□ -1.83
SPASTQ9UBP0 MIR217-201ENST00000384817 110 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 MIR34B-201ENST00000385076 84 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 RNA5SP424-201ENST00000390988 115 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SPASTQ9UBP0 AL024474.1-201ENST00000404655 591 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 HSPE1P8-201ENST00000406997 288 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 AL133264.1-201ENST00000407157 562 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.65□□□□□ -1.83
SPASTQ9UBP0 RAD23BP2-201ENST00000416003 1207 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms