Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 AC091304.9-201ENST00000612091 226 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC243773.3-201ENST00000613270 256 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC090510.2-201ENST00000617465 629 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC092794.2-201ENST00000620933 563 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC138649.3-201ENST00000622154 254 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC108467.2-201ENST00000617640 1597 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC007390.2-201ENST00000606229 3803 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC074029.4-201ENST00000624796 1859 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 MTND5P28-201ENST00000438005 1594 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 OR4A15-201ENST00000314706 1035 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 RPS3AP23-201ENST00000401762 784 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 MTND4LP20-201ENST00000402379 270 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 CIR1P3-201ENST00000405137 479 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 HDGFP1-201ENST00000405943 252 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 Y_RNA.598-201ENST00000410480 95 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 RNA5SP113-201ENST00000410486 84 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 VDAC1P9-201ENST00000412766 841 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 SDCBPP2-201ENST00000424643 885 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 BX890604.2-201ENST00000427883 474 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC092427.1-201ENST00000439177 601 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 USP9YP12-201ENST00000450481 570 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC013267.1-201ENST00000458227 267 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 MEMO1P3-201ENST00000459811 302 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC114981.1-201ENST00000503897 678 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 ARL2BPP6-201ENST00000512757 439 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 RNU6-150P-201ENST00000516237 95 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 RNU6-430P-201ENST00000517078 107 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AP004247.1-201ENST00000531556 1289 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC006960.3-201ENST00000561845 705 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 SULT1C2P1-202ENST00000562418 459 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 MIR4307-201ENST00000582802 84 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 VN1R79P-201ENST00000593540 513 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 PRELID3BP8-201ENST00000604148 295 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC091965.4-201ENST00000607691 587 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC097468.3-201ENST00000607956 456 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC017083.3-201ENST00000609955 700 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AL359314.1-201ENST00000616913 261 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC136475.10-201ENST00000620253 385 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC087385.3-201ENST00000620477 187 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC068870.2-201ENST00000620635 389 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC124864.2-201ENST00000624736 186 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 MIR3688-2-201ENST00000636963 87 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 DCAF13P1-201ENST00000495256 1330 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 AC006378.2-201ENST00000623178 2476 ntBASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SH3BP4Q9P0V3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC017104.4-201ENST00000636283 1592 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RNU6-694P-201ENST00000364071 147 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 SNORA74A-201ENST00000364089 198 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms