Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 AC012119.1-201ENST00000603184 222 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 AC005156.1-201ENST00000613371 573 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 AC092184.1-201ENST00000625042 715 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CISHQ9NSE2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CISHQ9NSE2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CISHQ9NSE2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 RNU1-112P-201ENST00000364401 164 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 BMS1P22-201ENST00000414726 313 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 MTND2P16-201ENST00000419987 799 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AP000893.1-201ENST00000474462 794 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 HMGB1P3-201ENST00000502802 616 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 DYNLL1P6-201ENST00000503440 264 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC097462.2-201ENST00000504623 481 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 CCNHP1-201ENST00000513311 678 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 SNORA9.3-201ENST00000516383 129 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 RNU4-60P-201ENST00000517239 135 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AP000857.1-201ENST00000532151 543 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC025260.1-201ENST00000548858 430 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC006116.7-201ENST00000590141 756 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC069304.3-201ENST00000603938 1084 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 OR2BH1P-201ENST00000608850 864 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC055764.2-201ENST00000610089 670 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 AL590410.1-201ENST00000617925 333 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC006386.2-201ENST00000624491 75 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 AC012005.1-201ENST00000624575 75 ntBASIC2.94□□□□□ -1.94
CISHQ9NSE2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CISHQ9NSE2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.94□□□□□ -1.94
CISHQ9NSE2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 MIR591-201ENST00000385290 95 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 COTL1P1-201ENST00000422309 375 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC008065.1-201ENST00000428525 348 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC105272.1-201ENST00000438604 198 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AL662791.1-201ENST00000441992 928 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 VN1R48P-201ENST00000448149 1036 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 TPMTP4-201ENST00000450749 678 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 snoU13.24-201ENST00000458998 104 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC110792.2-201ENST00000510278 224 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 ACTR6P1-201ENST00000514311 1104 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 SEC11B-201ENST00000518383 499 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AP001207.1-201ENST00000524051 481 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC006504.3-201ENST00000586818 523 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC096947.1-201ENST00000603233 470 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC090425.2-201ENST00000608818 501 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC015726.3-201ENST00000624501 418 ntBASIC2.93□□□□□ -1.94
CISHQ9NSE2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CISHQ9NSE2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CISHQ9NSE2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CISHQ9NSE2 AC005183.1-201ENST00000603687 1979 ntBASIC2.92□□□□□ -1.94
CISHQ9NSE2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.92□□□□□ -1.94
CISHQ9NSE2 AC092326.2-201ENST00000624772 1561 ntBASIC2.92□□□□□ -1.94
CISHQ9NSE2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CISHQ9NSE2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.92□□□□□ -1.94
CISHQ9NSE2 SAGE4P-201ENST00000442271 3381 ntBASIC2.92□□□□□ -1.94
CISHQ9NSE2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CISHQ9NSE2 AL590004.2-201ENST00000404787 371 ntBASIC2.92□□□□□ -1.94
CISHQ9NSE2 RNA5SP21-201ENST00000410917 96 ntBASIC2.92□□□□□ -1.94
CISHQ9NSE2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.92□□□□□ -1.94
CISHQ9NSE2 BTF3P9-201ENST00000418784 283 ntBASIC2.92□□□□□ -1.94
CISHQ9NSE2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.92□□□□□ -1.94
CISHQ9NSE2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.92□□□□□ -1.94
CISHQ9NSE2 AC112220.1-201ENST00000434628 355 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms