Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OR5H3P-201ENST00000502817 919 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC011352.3-201ENST00000505162 593 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC110768.1-201ENST00000509222 400 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 MIR2276-201ENST00000516886 89 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 BNIP3P5-201ENST00000562290 498 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC079148.1-201ENST00000565944 819 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC128687.1-201ENST00000605304 619 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC092650.2-201ENST00000619984 902 ntBASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC40Q9H9A6 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 SGO1P1-201ENST00000603525 1447 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 RNU1-75P-201ENST00000347264 129 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 RAB9AP3-201ENST00000412737 573 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 Z99755.1-201ENST00000414048 380 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 RPS7P15-201ENST00000415804 584 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 LIPT1P1-201ENST00000415870 1186 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 SYF2P2-201ENST00000417620 583 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AL035410.1-201ENST00000427409 427 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 BX679664.1-201ENST00000434429 253 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 RAB9AP1-201ENST00000449393 573 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 FABP5P12-201ENST00000515543 389 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC087481.2-201ENST00000565492 330 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 RN7SL622P-201ENST00000585292 275 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC067852.3-201ENST00000589177 561 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AL118556.2-201ENST00000614375 824 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC073968.1-201ENST00000618594 637 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AL731566.2-201ENST00000618971 317 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC097372.4-201ENST00000625025 466 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 MTND2P41-201ENST00000637599 773 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AC009093.8-201ENST00000641769 292 ntBASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC40Q9H9A6 AL645568.2-201ENST00000432815 1337 ntBASIC3.46□□□□□ -1.85
LRRC40Q9H9A6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
LRRC40Q9H9A6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
LRRC40Q9H9A6 AL645937.1-201ENST00000641739 1652 ntBASIC3.46□□□□□ -1.85
LRRC40Q9H9A6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 MIR554-201ENST00000384874 96 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 MIR16-1-201ENST00000385271 89 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL356968.1-201ENST00000416622 474 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 RPS15AP6-201ENST00000420703 385 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC018644.1-201ENST00000429934 551 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 ATP5JP1-201ENST00000431631 322 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC092641.1-201ENST00000440229 772 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL133547.1-201ENST00000448546 220 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 RBMY2UP-201ENST00000453474 324 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 RPS4XP22-201ENST00000480755 780 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 MTND3P24-201ENST00000506306 329 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 RNU1-45P-201ENST00000517191 141 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL163153.1-201ENST00000554223 283 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AC011492.1-201ENST00000600023 315 ntBASIC3.46□□□□□ -1.86
LRRC40Q9H9A6 AL109653.1-201ENST00000603091 248 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms