Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 OR52B1P-201ENST00000316506 909 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 RNU1-83P-201ENST00000363426 164 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 Y_RNA.144-201ENST00000363521 113 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 SSXP10-201ENST00000402595 565 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 GSTA9P-201ENST00000406231 611 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 RNU2-28P-201ENST00000410457 189 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 RN7SKP126-201ENST00000411143 300 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 USP9YP13-201ENST00000417797 480 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 PDCL2P1-201ENST00000419302 352 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 TIMM9P3-201ENST00000428659 274 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS11Q9H270 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AL033528.1-201ENST00000453780 140 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC087385.1-201ENST00000475062 312 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 RPS4XP1-201ENST00000482189 787 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 RPL7P51-201ENST00000490532 749 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 SAP18P1-201ENST00000512058 390 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 OR5AP1P-201ENST00000529730 940 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 ZNF705CP-201ENST00000530515 889 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC090502.2-201ENST00000549267 280 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC078814.3-201ENST00000553036 491 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AL389895.1-201ENST00000554127 252 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS11Q9H270 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC107954.1-201ENST00000565906 727 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC087283.1-201ENST00000604029 1074 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC087783.2-201ENST00000605070 562 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AC011373.1-201ENST00000607270 237 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AP001521.1-201ENST00000609150 300 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS11Q9H270 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC009643.2-201ENST00000603543 1448 ntBASIC4.95□□□□□ -1.62
VPS11Q9H270 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS11Q9H270 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS11Q9H270 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS11Q9H270 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS11Q9H270 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS11Q9H270 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS11Q9H270 RNU6-984P-201ENST00000363236 109 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 RNU6-877P-201ENST00000383868 107 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 Y_RNA.409-201ENST00000383990 98 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 RNU6-483P-201ENST00000384088 108 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 RNU6-1226P-201ENST00000384317 107 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 MIR606-201ENST00000384851 96 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 SNORA75.4-201ENST00000391278 119 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AL023807.1-201ENST00000407932 359 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS11Q9H270 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS11Q9H270 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS11Q9H270 AC062016.2-201ENST00000420950 676 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS11Q9H270 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
VPS11Q9H270 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AL121776.1-201ENST00000429337 372 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AC092162.1-201ENST00000432828 434 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 OR52B5P-201ENST00000435337 951 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 RPL7P11-201ENST00000437586 658 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS11Q9H270 TCEA1P1-201ENST00000449716 880 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS11Q9H270 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS11Q9H270 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS11Q9H270 AC023141.9-201ENST00000458734 412 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS11Q9H270 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS11Q9H270 PGAM1P13-201ENST00000507497 754 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AC016065.2-201ENST00000514530 444 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 RNA5SP362-201ENST00000516048 118 ntBASIC4.94□□□□□ -1.62
VPS11Q9H270 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms