Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHAC1Q9H158 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHAC1Q9H158 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHAC1Q9H158 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHAC1Q9H158 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 TEX21P-201ENST00000447107 1476 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 NXPH1-205ENST00000602349 1953 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 MTND4P26-201ENST00000415971 1359 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 RNU1-15P-201ENST00000353977 144 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 RNU6-359P-201ENST00000365466 108 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 MIR93-201ENST00000385024 80 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 HMGN1P14-201ENST00000412459 517 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 RPL36AP36-201ENST00000418616 301 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 RPL23AP25-201ENST00000430973 463 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC091862.1-201ENST00000438016 1100 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 RPS24P1-201ENST00000438550 371 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 PDSS1P2-201ENST00000449397 678 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL590365.1-201ENST00000450788 243 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL353691.1-201ENST00000451332 387 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 ISCUP1-201ENST00000454451 448 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 snoU13.3-201ENST00000459441 104 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 RPS23P1-201ENST00000491662 432 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC112204.1-201ENST00000502591 103 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 PAICSP4-201ENST00000517543 1253 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC022878.1-201ENST00000530684 149 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC008033.2-201ENST00000542626 177 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC069240.1-201ENST00000548774 375 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 HMGN2P6-201ENST00000551091 273 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC004853.1-201ENST00000604902 698 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL365503.1-201ENST00000605247 905 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL451086.1-201ENST00000605596 223 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC104010.1-201ENST00000616889 150 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC018445.2-201ENST00000622987 260 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC006065.5-201ENST00000623427 349 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC091905.4-201ENST00000623432 202 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AP001784.1-201ENST00000624107 428 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL603839.4-201ENST00000624658 1005 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AL392088.2-201ENST00000637607 285 ntBASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
PCDHAC1Q9H158 AC027287.1-201ENST00000553115 1453 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 MTND5P3-201ENST00000438536 1800 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 Y_RNA.359-201ENST00000365498 102 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 RNU6-1207P-201ENST00000384343 107 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 RNU2-16P-201ENST00000410712 136 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AC069285.2-201ENST00000440210 275 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 HMGB3P9-201ENST00000441799 583 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 H2AFZP5-201ENST00000446960 382 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 SNORD42A-201ENST00000459584 64 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AC006390.1-201ENST00000508068 283 ntBASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHAC1Q9H158 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms