Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 POU5F1P7-201ENST00000508759 541 ntBASIC4.03□□□□□ -1.76
SCAPERQ9BY12 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAPERQ9BY12 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.02□□□□□ -1.77
SCAPERQ9BY12 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SCAPERQ9BY12 AL136964.1-201ENST00000622038 2990 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 RNVU1-3-201ENST00000364313 161 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 RNU4-53P-201ENST00000410828 140 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 AC012498.1-201ENST00000424037 437 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 MTCO1P51-201ENST00000427672 1060 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCAPERQ9BY12 RN7SL75P-201ENST00000461926 281 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 AC241585.2-209ENST00000638217 143 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 AP000526.1-201ENST00000603308 1388 ntBASIC4.02□□□□□ -1.77
SCAPERQ9BY12 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 MIR26A1-201ENST00000362205 77 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 CYCSP45-201ENST00000402289 315 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 MRPS33P4-201ENST00000434892 317 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 IFNA11P-201ENST00000446352 526 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 AC243972.3-201ENST00000539655 198 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 AC022069.1-201ENST00000582910 658 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 AC093831.2-201ENST00000624393 3427 ntBASIC4.01□□□□□ -1.77
SCAPERQ9BY12 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCAPERQ9BY12 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SCAPERQ9BY12 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4□□□□□ -1.77
SCAPERQ9BY12 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCAPERQ9BY12 AC093010.3-201ENST00000570269 15214 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCAPERQ9BY12 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
SCAPERQ9BY12 SNORD62.1-201ENST00000362541 86 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 MIR1289-2-201ENST00000408360 111 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 AC092013.1-201ENST00000438795 332 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 RPL23AP62-201ENST00000463396 453 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4□□□□□ -1.77
SCAPERQ9BY12 RNU6-991P-201ENST00000516168 107 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4□□□□□ -1.77
SCAPERQ9BY12 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4□□□□□ -1.77
SCAPERQ9BY12 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4□□□□□ -1.77
SCAPERQ9BY12 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4□□□□□ -1.77
SCAPERQ9BY12 AC010338.1-201ENST00000621823 717 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 AC103798.2-201ENST00000624292 632 ntBASIC4□□□□□ -1.77
SCAPERQ9BY12 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCAPERQ9BY12 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SCAPERQ9BY12 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCAPERQ9BY12 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 OR4G1P-202ENST00000641173 1788 ntBASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AL139415.2-201ENST00000431968 163 ntBASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AC009969.1-201ENST00000438726 172 ntBASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AP000926.1-201ENST00000479573 241 ntBASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AC093663.2-201ENST00000484625 313 ntBASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 MIR4648-201ENST00000580107 72 ntBASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SCAPERQ9BY12 AL353743.4-201ENST00000422653 1547 ntBASIC3.99□□□□□ -1.77
SCAPERQ9BY12 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCAPERQ9BY12 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.98□□□□□ -1.77
SCAPERQ9BY12 RNA5SP425-201ENST00000410336 112 ntBASIC3.98□□□□□ -1.77
SCAPERQ9BY12 RPL21P41-201ENST00000459863 264 ntBASIC3.98□□□□□ -1.77
SCAPERQ9BY12 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.98□□□□□ -1.77
SCAPERQ9BY12 AL391156.1-201ENST00000554965 554 ntBASIC3.98□□□□□ -1.77
SCAPERQ9BY12 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.98□□□□□ -1.77
SCAPERQ9BY12 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.98□□□□□ -1.77
SCAPERQ9BY12 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.98□□□□□ -1.77
SCAPERQ9BY12 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
SCAPERQ9BY12 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCAPERQ9BY12 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 FAM133CP-201ENST00000332869 704 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AL590290.1-201ENST00000405336 380 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 NDUFB4P5-201ENST00000415445 361 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 RPL23AP31-201ENST00000456160 467 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 RN7SL283P-201ENST00000489055 303 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms