Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP47Q96K76 AC092593.1-201ENST00000515413 1815 ntBASIC3.95□□□□□ -1.78
USP47Q96K76 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP47Q96K76 RNA5SP432-201ENST00000362480 116 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP47Q96K76 Z93242.1-201ENST00000427102 353 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.94□□□□□ -1.78
USP47Q96K76 AC073508.1-201ENST00000428866 656 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 RPS6P12-201ENST00000432491 726 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 MRPS33P4-201ENST00000434892 317 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.94□□□□□ -1.78
USP47Q96K76 AC108938.1-201ENST00000451204 136 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 HMGB3P21-201ENST00000452483 547 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.94□□□□□ -1.78
USP47Q96K76 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.94□□□□□ -1.78
USP47Q96K76 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.94□□□□□ -1.78
USP47Q96K76 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP47Q96K76 AC084757.1-201ENST00000559987 490 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 AC007423.1-201ENST00000605009 627 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 AC090115.4-201ENST00000609970 188 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 AL020991.1-201ENST00000612314 373 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 AC011472.4-201ENST00000615848 491 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 LINC00216-201ENST00000623548 1126 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 CFTRP2-201ENST00000634304 199 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 AC096656.1-201ENST00000623826 1364 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 AC093311.1-201ENST00000506586 2021 ntBASIC3.94□□□□□ -1.78
USP47Q96K76 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USP47Q96K76 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP47Q96K76 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP47Q96K76 MIR181B1-201ENST00000385240 110 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 RPS4XP8-201ENST00000402039 771 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 RPL31P52-201ENST00000407532 367 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 MTND4P11-201ENST00000417020 1058 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.93□□□□□ -1.78
USP47Q96K76 VDAC1P3-201ENST00000434069 851 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 AL513043.1-201ENST00000439124 535 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 AL109933.2-201ENST00000452651 260 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.93□□□□□ -1.78
USP47Q96K76 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.93□□□□□ -1.78
USP47Q96K76 AC093755.1-201ENST00000512950 1023 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 RNU6-1004P-201ENST00000516584 111 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 PDCL2P2-201ENST00000533651 189 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.93□□□□□ -1.78
USP47Q96K76 MIR4435-1-201ENST00000582552 80 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 AC006111.3-201ENST00000622137 383 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 AC015726.3-201ENST00000624501 418 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 AC116563.2-201ENST00000624751 535 ntBASIC3.93□□□□□ -1.78
USP47Q96K76 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
USP47Q96K76 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.93□□□□□ -1.78
USP47Q96K76 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.93□□□□□ -1.78
USP47Q96K76 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP47Q96K76 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.93□□□□□ -1.78
USP47Q96K76 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP47Q96K76 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.93□□□□□ -1.78
USP47Q96K76 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.92□□□□□ -1.78
USP47Q96K76 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
USP47Q96K76 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.92□□□□□ -1.78
USP47Q96K76 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.92□□□□□ -1.78
USP47Q96K76 AC105402.1-201ENST00000413336 545 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.92□□□□□ -1.78
USP47Q96K76 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 SUMO1P1-201ENST00000497904 306 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.92□□□□□ -1.78
USP47Q96K76 AC017037.2-201ENST00000513850 890 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.92□□□□□ -1.78
USP47Q96K76 SNORD116-26-201ENST00000516006 96 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 AC007954.1-201ENST00000554198 494 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.92□□□□□ -1.78
USP47Q96K76 AL096803.3-201ENST00000609032 532 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP47Q96K76 AL450489.1-201ENST00000612071 468 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 AC123768.4-201ENST00000616244 701 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 AC092628.2-201ENST00000622492 339 ntBASIC3.92□□□□□ -1.78
USP47Q96K76 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP47Q96K76 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.92□□□□□ -1.78
USP47Q96K76 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.92□□□□□ -1.78
USP47Q96K76 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.92□□□□□ -1.78
USP47Q96K76 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.92□□□□□ -1.78
USP47Q96K76 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP47Q96K76 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP47Q96K76 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP47Q96K76 AL031679.1-201ENST00000400616 525 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 AL512504.1-201ENST00000415494 778 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.91□□□□□ -1.78
USP47Q96K76 AL035407.1-201ENST00000429211 571 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 AC087499.2-201ENST00000432861 149 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
USP47Q96K76 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.91□□□□□ -1.78
USP47Q96K76 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.91□□□□□ -1.78
USP47Q96K76 AC055876.1-202ENST00000567053 138 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 MIR548Y-201ENST00000582739 110 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 MIR4512-201ENST00000583257 77 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 AL359757.2-201ENST00000624309 274 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 MIR6715B-201ENST00000637172 77 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
USP47Q96K76 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP47Q96K76 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
USP47Q96K76 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.91□□□□□ -1.78
USP47Q96K76 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms