Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 PAXBP1P1-201ENST00000449315 447 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RPL36AP33-201ENST00000450395 310 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC073387.1-201ENST00000453261 709 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 USP9YP34-201ENST00000453983 808 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RN7SL98P-201ENST00000462271 300 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC105137.1-201ENST00000484355 562 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RPS4XP15-201ENST00000489210 795 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC005798.1-201ENST00000513715 387 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC022861.1-201ENST00000522981 663 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC092851.1-201ENST00000535964 478 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AL352979.3-201ENST00000553515 247 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 CENPUP2-201ENST00000555897 1186 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 PSMB7P1-201ENST00000556349 514 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AP003117.2-201ENST00000606010 545 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC092354.1-201ENST00000606057 376 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC015813.4-201ENST00000610469 179 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC090116.1-201ENST00000615679 446 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 MIR6891-201ENST00000618788 93 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RMST_9.1-201ENST00000619945 193 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 CR383658.2-201ENST00000547576 1525 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AC017104.4-201ENST00000636283 1592 ntBASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.16□□□□□ -1.58
CHMP4CQ96CF2 AL158163.1-201ENST00000603915 1649 ntBASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 AC022893.2-201ENST00000564832 3296 ntBASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 AC008725.1-201ENST00000605123 2263 ntBASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 Z73965.1-201ENST00000623412 2297 ntBASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 ZNF734P-201ENST00000419494 1534 ntBASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CHMP4CQ96CF2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 Y_RNA.77-201ENST00000362962 107 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 RNU6-433P-201ENST00000363216 104 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 RNU1-132P-201ENST00000364300 164 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 SNORA70E-201ENST00000384492 135 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 SNORA26.8-201ENST00000391306 124 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC007066.1-201ENST00000392902 381 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 OR6C69P-201ENST00000394268 893 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 HMGB1P11-201ENST00000413899 637 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 NPM1P11-201ENST00000417106 855 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 FNDC3CP-201ENST00000420795 1155 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC244035.1-201ENST00000430042 390 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AL117351.1-201ENST00000438864 766 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 ABCF2P2-201ENST00000450549 296 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 RN7SL303P-201ENST00000469773 251 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC041039.1-201ENST00000485656 536 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC109458.1-201ENST00000508858 316 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 OR5M7P-201ENST00000526140 972 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 CYP4A43P-201ENST00000568156 121 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 ROCK1P1-201ENST00000573767 549 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 MTCYBP33-201ENST00000575007 1130 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AP001004.1-201ENST00000582468 324 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 IPO5P1-202ENST00000600039 287 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC092653.1-201ENST00000608509 531 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AC006338.2-201ENST00000616864 791 ntBASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHMP4CQ96CF2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms