Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RN7SKP235-201ENST00000410662 305 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 GSTM3P2-201ENST00000412746 530 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5□□□□□ -1.61
NUP43Q8NFH3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5□□□□□ -1.61
NUP43Q8NFH3 AL590639.1-201ENST00000456484 337 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC100832.1-201ENST00000471945 383 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 RPL5P22-201ENST00000480199 884 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC027575.1-201ENST00000481064 460 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC058823.1-201ENST00000485315 474 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5□□□□□ -1.61
NUP43Q8NFH3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5□□□□□ -1.61
NUP43Q8NFH3 AC005741.1-201ENST00000511094 432 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC022360.1-201ENST00000521058 340 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5□□□□□ -1.61
NUP43Q8NFH3 AP000859.1-201ENST00000525536 307 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AP003497.1-201ENST00000528472 562 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5□□□□□ -1.61
NUP43Q8NFH3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5□□□□□ -1.61
NUP43Q8NFH3 RPL23AP92-201ENST00000603609 255 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC136443.5-201ENST00000603741 370 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AL512624.1-201ENST00000613638 469 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 AC022467.1-201ENST00000614738 749 ntBASIC5□□□□□ -1.61
NUP43Q8NFH3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5□□□□□ -1.61
NUP43Q8NFH3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP43Q8NFH3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
NUP43Q8NFH3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
NUP43Q8NFH3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 Y_RNA.202-201ENST00000364083 110 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RNU6-39P-201ENST00000384344 107 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 MIR92A2-201ENST00000385299 75 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RNA5SP345-201ENST00000410646 108 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RNU2-62P-201ENST00000410868 191 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 OR1AA1P-201ENST00000419597 916 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC022431.1-201ENST00000450941 438 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC104073.1-201ENST00000451988 151 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AL136126.1-201ENST00000473603 402 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC090096.1-201ENST00000489168 390 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RN7SL466P-201ENST00000497546 295 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC004062.1-201ENST00000509926 645 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC105417.1-201ENST00000514691 285 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RNU6-559P-201ENST00000516151 98 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 SNORA25.17-201ENST00000517184 124 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AL355836.1-201ENST00000555951 870 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC060771.1-201ENST00000582031 164 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC006116.10-201ENST00000591836 581 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC068790.3-201ENST00000602988 553 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AL627309.6-201ENST00000606857 840 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AL022345.1-201ENST00000607292 135 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 OR6R2P-201ENST00000609216 300 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RNU6-156P-201ENST00000621869 107 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 MIR8080-201ENST00000622224 89 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 MUC2-202ENST00000613187 4845 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 AC004972.1-201ENST00000623934 2209 ntBASIC4.99□□□□□ -1.61
NUP43Q8NFH3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP43Q8NFH3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NUP43Q8NFH3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms