Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SET-203ENST00000372688 801 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RNU6-1060P-201ENST00000384664 107 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RNU4-46P-201ENST00000410818 138 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RPL35AP3-201ENST00000414680 288 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AL160004.2-201ENST00000432935 350 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RPL12P3-201ENST00000440080 396 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 GAPDHP23-201ENST00000444823 993 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 EEF1B2P6-201ENST00000445713 673 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC073850.1-201ENST00000449243 255 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC010733.1-201ENST00000451515 401 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC022034.3-201ENST00000471393 478 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 OR2AO1P-201ENST00000476497 403 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RANP9-201ENST00000519957 271 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 OR11H5P-201ENST00000554039 926 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC110743.1-201ENST00000584870 478 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AL008729.2-201ENST00000606393 473 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AC055839.1-201ENST00000634467 498 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 PABPC1P6-201ENST00000445594 1829 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 AL034546.1-201ENST00000623740 3693 ntBASIC6.29□□□□□ -1.4
RNF135Q8IUD6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF135Q8IUD6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC011504.1-201ENST00000623331 4103 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 Y_RNA.5-201ENST00000362334 102 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RNVU1-3-201ENST00000364313 161 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RNU6-61P-201ENST00000365528 109 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RNU1-74P-201ENST00000384108 171 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 SNORA24.1-201ENST00000384401 135 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RNU6-310P-201ENST00000384655 107 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 Y_RNA.576-201ENST00000384781 102 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AL360182.1-201ENST00000397433 468 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 DBIP1-201ENST00000401435 260 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 MRPL42P3-201ENST00000401492 326 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RN7SKP125-201ENST00000410481 302 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC114491.1-201ENST00000416095 246 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 MCFD2P1-201ENST00000417812 300 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RPL7P46-201ENST00000425129 740 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC126120.1-201ENST00000431082 470 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC092162.1-201ENST00000432828 434 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RPS27AP3-201ENST00000453803 454 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC004453.1-201ENST00000487895 408 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 RNU6-64P-201ENST00000517119 105 ntBASIC6.28□□□□□ -1.4
RNF135Q8IUD6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.28□□□□□ -1.4
RNF135Q8IUD6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms