Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC027309.2-201ENST00000520566 192 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 DUXAP5-201ENST00000529668 529 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 MTCO2P15-201ENST00000532655 656 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 LSM6P2-201ENST00000552208 177 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 RPL21P12-201ENST00000559810 515 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC061975.8-201ENST00000587058 721 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 VN1R92P-201ENST00000598511 928 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC021755.4-201ENST00000616620 456 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AL591424.2-201ENST00000617023 128 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 AC243312.2-201ENST00000623340 601 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 PRO1804-201ENST00000623780 2050 ntBASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LYSMD4Q5XG99 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 MTCO1P14-201ENST00000441695 1559 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC109315.1-201ENST00000584143 1347 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 SAGE4P-201ENST00000442271 3381 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 RNU4-28P-201ENST00000364739 141 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 Y_RNA.408-201ENST00000383987 102 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AL355379.1-201ENST00000405542 640 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 RNU2-42P-201ENST00000410697 113 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AL008987.1-201ENST00000415528 237 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 MTND2P16-201ENST00000419987 799 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC084290.1-201ENST00000434995 374 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 ARL4AP3-201ENST00000441452 574 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 RPL21P23-201ENST00000446654 460 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC098826.2-201ENST00000452011 651 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 MTCO3P2-201ENST00000457365 171 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC010301.1-201ENST00000473936 355 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC006517.1-201ENST00000480485 328 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 RNU6-1225P-201ENST00000516336 65 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 Vault.1-201ENST00000516474 102 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC138915.2-201ENST00000569776 97 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AL031985.2-201ENST00000600955 480 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC007349.4-201ENST00000608114 532 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC018816.2-201ENST00000621460 353 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 AC019226.2-201ENST00000625973 424 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 MKKS-204ENST00000639674 192 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 MTND5P3-201ENST00000438536 1800 ntBASIC3.77□□□□□ -1.81
LYSMD4Q5XG99 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 RNU5D-1-201ENST00000363299 116 ntBASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 NDUFB4P4-201ENST00000404822 243 ntBASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 AL603766.1-201ENST00000407763 664 ntBASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 AL590084.1-201ENST00000407885 387 ntBASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 AL023807.1-201ENST00000407932 359 ntBASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 RNA5SP146-201ENST00000410743 123 ntBASIC3.76□□□□□ -1.81
LYSMD4Q5XG99 RPL31P2-201ENST00000413849 377 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms