Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 RAP1BP1-201ENST00000412709 553 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AC008716.1-201ENST00000511084 513 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AL353743.4-201ENST00000422653 1547 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AL359511.1-201ENST00000402970 211 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 ATG3P1-201ENST00000419507 911 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 HMGB1P15-201ENST00000453854 435 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 MTCO3P20-201ENST00000454926 688 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AC092185.1-201ENST00000491371 97 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 OR4G11P-201ENST00000492842 939 ntBASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13DQ5THJ4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 PRELID3BP7-201ENST00000503606 469 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AL355836.1-201ENST00000555951 870 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AP000942.3-201ENST00000603702 160 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC131238.1-201ENST00000617135 328 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC006111.3-201ENST00000622137 383 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 DPH3P2-201ENST00000422618 250 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC003982.1-202ENST00000469928 248 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 FABP5P12-201ENST00000515543 389 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC044913.1-201ENST00000557200 430 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC010928.3-201ENST00000587712 541 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC069234.5-201ENST00000611056 416 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC069528.2-201ENST00000624849 1991 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC116337.1-201ENST00000509680 687 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 TXNP6-201ENST00000510190 310 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC108471.1-201ENST00000513977 287 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 RN7SKP60-201ENST00000516985 239 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AP000867.2-201ENST00000532468 320 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 AC005046.1-201ENST00000608515 625 ntBASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS13DQ5THJ4 RNA5SP456-201ENST00000364002 114 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 RPL21P3-201ENST00000395517 478 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC146507.2-201ENST00000460608 476 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 TRBV1-201ENST00000476502 284 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 OR5BN1P-201ENST00000532955 829 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC022884.3-201ENST00000579571 248 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 RNA5SP508-201ENST00000411327 119 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC108210.2-201ENST00000503681 201 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 RNA5SP383-201ENST00000362934 120 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 RNA5SP99-201ENST00000364020 114 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC245517.2-201ENST00000442890 346 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 RNA5SP458-201ENST00000516188 119 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 CRYM-AS1-204ENST00000637983 556 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms