Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU6-352P-201ENST00000516908 107 ntBASIC4.2□□□□□ -1.74
USP41Q3LFD5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 AC009712.1-201ENST00000564938 316 ntBASIC4.2□□□□□ -1.74
USP41Q3LFD5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 AC067852.4-201ENST00000590314 478 ntBASIC4.2□□□□□ -1.74
USP41Q3LFD5 AC104662.1-201ENST00000604448 511 ntBASIC4.2□□□□□ -1.74
USP41Q3LFD5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 AL139418.1-201ENST00000613613 177 ntBASIC4.2□□□□□ -1.74
USP41Q3LFD5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 AC092184.1-201ENST00000625042 715 ntBASIC4.2□□□□□ -1.74
USP41Q3LFD5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 MIR6715B-201ENST00000637172 77 ntBASIC4.2□□□□□ -1.74
USP41Q3LFD5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP41Q3LFD5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
USP41Q3LFD5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP41Q3LFD5 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 MTND5P28-201ENST00000438005 1594 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 MARK2P15-201ENST00000432204 2186 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC117529.2-201ENST00000512159 2068 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 RNU6-1243P-201ENST00000364028 107 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AL049545.1-201ENST00000401856 572 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 RNA5SP44-201ENST00000410446 133 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC073264.1-201ENST00000411508 416 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC069218.2-201ENST00000411665 344 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 RAP1BP1-201ENST00000412709 553 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 RPL7AP73-201ENST00000413490 353 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC069157.1-201ENST00000421749 137 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC096632.1-201ENST00000427395 310 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 NPM1P34-201ENST00000428821 893 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AF228730.2-201ENST00000438784 848 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 MTCO1P48-201ENST00000448024 1096 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 NANOGP10-201ENST00000453325 895 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC006517.1-201ENST00000480485 328 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC005726.1-201ENST00000494679 427 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 HMGB1P28-201ENST00000507778 552 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC022968.1-201ENST00000567372 442 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC006539.2-201ENST00000601729 572 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AL133507.1-201ENST00000605269 557 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AP001521.1-201ENST00000609150 300 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC022079.1-201ENST00000621546 602 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 AC120349.2-201ENST00000625002 298 ntBASIC4.19□□□□□ -1.74
USP41Q3LFD5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP41Q3LFD5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP41Q3LFD5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP41Q3LFD5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
USP41Q3LFD5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP41Q3LFD5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP41Q3LFD5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP41Q3LFD5 RSL24D1P4-201ENST00000400938 484 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 SNORA3C-201ENST00000408792 125 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 PTP4A1P5-201ENST00000420305 455 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 SDCBPP2-201ENST00000424643 885 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 OR4F13P-201ENST00000428478 931 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 MTCYBP34-201ENST00000439552 670 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 snoU13.22-201ENST00000459428 104 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 RPS3AP22-201ENST00000488297 769 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 AP000563.1-201ENST00000490865 758 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 PRELID3BP7-201ENST00000503606 469 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC017037.1-201ENST00000508460 471 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC119751.5-201ENST00000514077 770 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 RNY4P37-201ENST00000516225 96 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 MIR2114-201ENST00000516645 80 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AP001636.2-201ENST00000525517 696 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 DEFB109D-201ENST00000529497 240 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 LSM6P2-201ENST00000552208 177 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC087499.8-201ENST00000578406 226 ntBASIC4.18□□□□□ -1.74
USP41Q3LFD5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.18□□□□□ -1.74
USP41Q3LFD5 AC103881.1-201ENST00000603476 538 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms