Protein–RNA interactions for Protein: Q16586

SGCA, Alpha-sarcoglycan, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCAQ16586 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SGCAQ16586 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
SGCAQ16586 RNU6-207P-201ENST00000384137 107 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RNU6-1151P-201ENST00000384684 107 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 RN7SKP53-201ENST00000411337 315 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.1□□□□□ -1.91
SGCAQ16586 AL009174.1-201ENST00000426577 416 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AL513175.1-201ENST00000431492 780 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RAB11AP1-201ENST00000442978 646 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RPL7P59-201ENST00000447700 943 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 OR51B8P-201ENST00000449892 769 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AC093392.2-201ENST00000450682 337 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 CDC42P1-201ENST00000456658 548 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.1□□□□□ -1.91
SGCAQ16586 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.1□□□□□ -1.91
SGCAQ16586 RPS4XP22-201ENST00000480755 780 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AC092902.1-201ENST00000486999 259 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.1□□□□□ -1.91
SGCAQ16586 HMGN1P15-201ENST00000513870 295 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 MTCO3P27-201ENST00000514397 196 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RNU6-202P-201ENST00000515998 96 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RNU1-95P-201ENST00000516357 160 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RNU1-128P-201ENST00000516704 160 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 RN7SKP277-201ENST00000516895 283 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SGCAQ16586 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.1□□□□□ -1.91
SGCAQ16586 AC026333.2-201ENST00000542164 106 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.1□□□□□ -1.91
SGCAQ16586 EIF5A2P1-201ENST00000564027 460 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.1□□□□□ -1.91
SGCAQ16586 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.1□□□□□ -1.91
SGCAQ16586 AC017100.2-201ENST00000584628 355 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AC093227.2-201ENST00000589357 285 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.1□□□□□ -1.91
SGCAQ16586 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 AC133794.1-201ENST00000602731 914 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.1□□□□□ -1.91
SGCAQ16586 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SGCAQ16586 CR392039.5-201ENST00000623201 510 ntBASIC3.1□□□□□ -1.91
SGCAQ16586 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCAQ16586 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.1□□□□□ -1.91
SGCAQ16586 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SGCAQ16586 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
SGCAQ16586 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 RNA5SP124-201ENST00000362739 110 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SGCAQ16586 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SGCAQ16586 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SGCAQ16586 U6.112-201ENST00000384129 70 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 DSTNP4-201ENST00000399472 474 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 RNU6-55P-201ENST00000411092 107 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 RNU6-954P-201ENST00000411355 107 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 RAB9AP3-201ENST00000412737 573 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.09□□□□□ -1.91
SGCAQ16586 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.09□□□□□ -1.91
SGCAQ16586 AC002542.1-201ENST00000440683 193 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 RPL21P133-201ENST00000443666 476 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SGCAQ16586 AL357552.1-201ENST00000445254 415 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 RAB9AP1-201ENST00000449393 573 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AC010401.1-201ENST00000463867 348 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 RN7SL594P-201ENST00000470590 287 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AC087312.1-201ENST00000471411 480 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AC015908.1-201ENST00000478739 476 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.09□□□□□ -1.91
SGCAQ16586 FCF1P3-201ENST00000496394 590 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.91
SGCAQ16586 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.09□□□□□ -1.91
SGCAQ16586 RNU1-61P-201ENST00000516107 151 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 SNORA70.19-201ENST00000516717 90 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 RN7SKP289-201ENST00000517244 295 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AP003355.1-201ENST00000518956 587 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 TRMT10BP1-201ENST00000519377 943 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 HIGD1AP6-201ENST00000521833 279 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.09□□□□□ -1.91
SGCAQ16586 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.09□□□□□ -1.91
SGCAQ16586 AC011602.1-201ENST00000546484 331 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 GTF2IP22-201ENST00000554443 182 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCAQ16586 MAGOH2P-202ENST00000584384 429 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AC092574.1-201ENST00000609771 420 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AC022149.2-201ENST00000621061 203 ntBASIC3.09□□□□□ -1.91
SGCAQ16586 AP000943.4-201ENST00000622912 357 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms