Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 SNORD105B-201ENST00000458770 79 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AC010307.1-201ENST00000467206 836 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 RN7SL293P-201ENST00000481765 281 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC093755.1-201ENST00000512950 1023 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN1Q12860 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AP000790.1-201ENST00000528891 737 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.67□□□□□ -1.82
CNTN1Q12860 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN1Q12860 MIR3912-201ENST00000577566 105 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTN1Q12860 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC015688.2-201ENST00000584523 262 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 MIR4760-201ENST00000585040 80 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AC020914.6-201ENST00000594327 272 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AL391001.1-201ENST00000602747 715 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AL035411.2-201ENST00000604022 421 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 AC092354.2-201ENST00000607786 514 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.67□□□□□ -1.82
CNTN1Q12860 AL512506.2-201ENST00000624472 458 ntBASIC3.67□□□□□ -1.82
CNTN1Q12860 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.67□□□□□ -1.82
CNTN1Q12860 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTN1Q12860 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CNTN1Q12860 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN1Q12860 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.67□□□□□ -1.82
CNTN1Q12860 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN1Q12860 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CNTN1Q12860 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CNTN1Q12860 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNTN1Q12860 AC090337.1-201ENST00000579651 2074 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTN1Q12860 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTN1Q12860 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNTN1Q12860 RNU6-1066P-201ENST00000363573 105 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 RNA5SP322-201ENST00000363617 119 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 RNA5SP387-201ENST00000364226 106 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 MIR183-201ENST00000384958 110 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 RNU6-1300P-201ENST00000391046 108 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN1Q12860 AC069218.2-201ENST00000411665 344 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN1Q12860 AC245052.5-201ENST00000416320 649 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.66□□□□□ -1.82
CNTN1Q12860 SEPT7P5-201ENST00000434048 306 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC073063.1-201ENST00000434352 607 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.66□□□□□ -1.82
CNTN1Q12860 EEF1A1P39-201ENST00000440791 250 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 Z77249.1-201ENST00000444622 1175 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 RPL21P23-201ENST00000446654 460 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.66□□□□□ -1.82
CNTN1Q12860 MTCO3P20-201ENST00000454926 688 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN1Q12860 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.66□□□□□ -1.82
CNTN1Q12860 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 RANP9-201ENST00000519957 271 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CNTN1Q12860 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.66□□□□□ -1.82
CNTN1Q12860 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.66□□□□□ -1.82
CNTN1Q12860 AL121766.1-201ENST00000547436 487 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.66□□□□□ -1.82
CNTN1Q12860 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN1Q12860 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.66□□□□□ -1.82
CNTN1Q12860 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.66□□□□□ -1.82
CNTN1Q12860 AC105429.2-201ENST00000610567 517 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC243312.2-201ENST00000623340 601 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 U6.105-201ENST00000637379 88 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CNTN1Q12860 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.66□□□□□ -1.82
CNTN1Q12860 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
CNTN1Q12860 Z99496.1-201ENST00000469424 1477 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 AC117529.2-201ENST00000512159 2068 ntBASIC3.66□□□□□ -1.82
CNTN1Q12860 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CNTN1Q12860 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.65□□□□□ -1.82
CNTN1Q12860 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CNTN1Q12860 MTCO1P12-201ENST00000414273 1543 ntBASIC3.65□□□□□ -1.82
CNTN1Q12860 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
CNTN1Q12860 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CNTN1Q12860 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CNTN1Q12860 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CNTN1Q12860 RNU4-68P-201ENST00000364314 141 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
CNTN1Q12860 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.65□□□□□ -1.83
CNTN1Q12860 RNU6-906P-201ENST00000384700 70 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 AC073264.1-201ENST00000411508 416 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.65□□□□□ -1.83
CNTN1Q12860 RPS12P23-201ENST00000419579 400 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 AC007435.1-201ENST00000421086 415 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 AL159169.1-201ENST00000421119 127 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 ELOCP6-201ENST00000429066 328 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 AC005345.1-201ENST00000431868 217 ntBASIC3.65□□□□□ -1.83
CNTN1Q12860 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms