Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.62□□□□□ -1.83
SCN1BQ07699 BNIP3P40-201ENST00000596017 556 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC234771.5-201ENST00000600161 514 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.62□□□□□ -1.83
SCN1BQ07699 AL354984.3-201ENST00000604803 325 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 AL451086.1-201ENST00000605596 223 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 AL391261.4-201ENST00000616012 481 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 uc_338.13-201ENST00000618243 179 ntBASIC3.62□□□□□ -1.83
SCN1BQ07699 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.62□□□□□ -1.83
SCN1BQ07699 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.62□□□□□ -1.83
SCN1BQ07699 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
SCN1BQ07699 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN1BQ07699 AL356473.1-201ENST00000406203 1408 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.61□□□□□ -1.83
SCN1BQ07699 OR5P1P-201ENST00000299512 925 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AC079741.1-201ENST00000321498 212 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 RPL23AP57-201ENST00000332361 466 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 RNU4-92P-201ENST00000363783 136 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SCN1BQ07699 PGBD4P8-201ENST00000412993 562 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 SSXP9-201ENST00000417503 292 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AL139095.3-201ENST00000419672 1203 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AL356387.2-201ENST00000422272 243 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.61□□□□□ -1.83
SCN1BQ07699 MTCO1P39-201ENST00000426148 480 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.61□□□□□ -1.83
SCN1BQ07699 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 RNU7-136P-201ENST00000458819 69 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AC017015.1-201ENST00000477387 286 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 AC093267.1-201ENST00000489176 961 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.61□□□□□ -1.83
SCN1BQ07699 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 AK3P4-201ENST00000504283 583 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 WBP1LP4-201ENST00000505043 344 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 KCTD9P2-201ENST00000512203 1013 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 SNORA31.8-201ENST00000516327 108 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 OR7E13P-201ENST00000526052 910 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.61□□□□□ -1.83
SCN1BQ07699 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.61□□□□□ -1.83
SCN1BQ07699 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.61□□□□□ -1.83
SCN1BQ07699 AC099489.2-201ENST00000574976 260 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.61□□□□□ -1.83
SCN1BQ07699 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.61□□□□□ -1.83
SCN1BQ07699 AL022099.1-201ENST00000604551 712 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AC004853.1-201ENST00000604902 698 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AC113403.1-201ENST00000604910 193 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AL390208.1-201ENST00000605885 644 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.61□□□□□ -1.83
SCN1BQ07699 AC009974.1-201ENST00000608881 455 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 CRYM-AS1-204ENST00000637983 556 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 TNPO1P3-201ENST00000436471 2662 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.61□□□□□ -1.83
SCN1BQ07699 OR56B2P-202ENST00000641377 2453 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AL079343.1-201ENST00000572358 1771 ntBASIC3.61□□□□□ -1.83
SCN1BQ07699 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCN1BQ07699 AL390862.1-201ENST00000635467 1469 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN1BQ07699 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN1BQ07699 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 CR381670.1-201ENST00000624291 1693 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 RNU6-621P-201ENST00000364752 109 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SCN1BQ07699 ATP5F1P4-201ENST00000397288 746 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AL583835.1-201ENST00000399570 407 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AL356131.1-201ENST00000405826 414 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 MIR1284-201ENST00000408337 120 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 RNA5SP36-201ENST00000410197 133 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 TPMTP2-201ENST00000414372 726 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN1BQ07699 BRWD1P3-201ENST00000428816 390 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 RPL23AP52-201ENST00000439311 478 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN1BQ07699 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms