Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 BPTFP1-201ENST00000579209 492 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 AC011471.1-201ENST00000585766 187 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 VN1R87P-201ENST00000596706 487 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 AL162713.1-201ENST00000604480 262 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 AL359535.1-201ENST00000612100 1087 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 RNU6-156P-201ENST00000621869 107 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.88□□□□□ -1.79
GABPAQ06546 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.88□□□□□ -1.79
GABPAQ06546 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GABPAQ06546 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.88□□□□□ -1.79
GABPAQ06546 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC017071.1-201ENST00000564407 2204 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GABPAQ06546 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GABPAQ06546 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GABPAQ06546 RNU6-1257P-201ENST00000384625 110 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 MIR620-201ENST00000385232 95 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 Z92545.1-201ENST00000411782 234 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 AC126124.2-201ENST00000413542 321 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.87□□□□□ -1.79
GABPAQ06546 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 YWHAZP8-201ENST00000436935 731 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 RAB11AP1-201ENST00000442978 646 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC109925.1-201ENST00000478069 331 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 AC092045.1-201ENST00000495716 1231 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GABPAQ06546 AC023141.12-201ENST00000512399 199 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 RNU6-202P-201ENST00000515998 96 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 MIR2276-201ENST00000516886 89 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.87□□□□□ -1.79
GABPAQ06546 PTP4A1P6-201ENST00000531034 478 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.87□□□□□ -1.79
GABPAQ06546 MIR2682-201ENST00000580305 110 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 AL020997.3-201ENST00000602843 359 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
GABPAQ06546 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.87□□□□□ -1.79
GABPAQ06546 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.87□□□□□ -1.79
GABPAQ06546 AC110801.1-201ENST00000623590 212 ntBASIC3.87□□□□□ -1.79
GABPAQ06546 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
GABPAQ06546 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.86□□□□□ -1.79
GABPAQ06546 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
GABPAQ06546 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
GABPAQ06546 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
GABPAQ06546 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
GABPAQ06546 OR1L1-202ENST00000373686 1083 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 MIR128-1-201ENST00000384921 82 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 RPL7P27-201ENST00000403775 720 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 GSTA8P-201ENST00000404253 637 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.86□□□□□ -1.79
GABPAQ06546 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 MTCYBP15-201ENST00000433123 1127 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.86□□□□□ -1.79
GABPAQ06546 SDR42E1P3-201ENST00000438345 502 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AC006028.1-201ENST00000438379 402 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.86□□□□□ -1.79
GABPAQ06546 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.86□□□□□ -1.79
GABPAQ06546 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.86□□□□□ -1.79
GABPAQ06546 RPL12P26-201ENST00000452430 487 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 snoU13.7-201ENST00000459220 104 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 RPL21P71-201ENST00000465598 459 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 AC091860.1-201ENST00000505723 432 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 PCBP2P3-201ENST00000509726 843 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 AC119751.1-201ENST00000513357 765 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 RN7SKP116-201ENST00000516902 319 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 HIGD1AP6-201ENST00000521833 279 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
GABPAQ06546 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.86□□□□□ -1.79
GABPAQ06546 ZNF971P-201ENST00000562068 1249 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.86□□□□□ -1.79
GABPAQ06546 MIR4325-201ENST00000583049 90 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 Z82195.1-201ENST00000604558 398 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AL160281.1-201ENST00000605307 311 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AL158050.2-201ENST00000605336 568 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AF129408.1-201ENST00000608767 431 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 RNVU1-4-201ENST00000612985 164 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 uc_338.32-201ENST00000615087 172 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms