Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC104073.1-201ENST00000451988 151 ntBASIC3.46□□□□□ -1.86
CBX1P83916 UBDP1-202ENST00000457888 382 ntBASIC3.46□□□□□ -1.86
CBX1P83916 AC091167.1-201ENST00000492017 396 ntBASIC3.46□□□□□ -1.86
CBX1P83916 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.46□□□□□ -1.86
CBX1P83916 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.46□□□□□ -1.86
CBX1P83916 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CBX1P83916 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.46□□□□□ -1.86
CBX1P83916 AC010198.2-201ENST00000550612 259 ntBASIC3.46□□□□□ -1.86
CBX1P83916 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.46□□□□□ -1.86
CBX1P83916 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.46□□□□□ -1.86
CBX1P83916 RN7SL600P-201ENST00000581811 299 ntBASIC3.46□□□□□ -1.86
CBX1P83916 AC068790.4-201ENST00000602474 263 ntBASIC3.46□□□□□ -1.86
CBX1P83916 DPRXP5-201ENST00000604662 539 ntBASIC3.46□□□□□ -1.86
CBX1P83916 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.46□□□□□ -1.86
CBX1P83916 MIR6748-201ENST00000610433 71 ntBASIC3.46□□□□□ -1.86
CBX1P83916 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CBX1P83916 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.46□□□□□ -1.86
CBX1P83916 AC107871.2-201ENST00000612894 502 ntBASIC3.46□□□□□ -1.86
CBX1P83916 AC090116.1-201ENST00000615679 446 ntBASIC3.46□□□□□ -1.86
CBX1P83916 AC006338.2-201ENST00000616864 791 ntBASIC3.46□□□□□ -1.86
CBX1P83916 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CBX1P83916 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.46□□□□□ -1.86
CBX1P83916 MIR7641-1-201ENST00000627518 61 ntBASIC3.46□□□□□ -1.86
CBX1P83916 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.46□□□□□ -1.86
CBX1P83916 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CBX1P83916 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.46□□□□□ -1.86
CBX1P83916 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CBX1P83916 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CBX1P83916 AC032011.1-201ENST00000611703 1549 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AC092447.7-201ENST00000422212 1621 ntBASIC3.45□□□□□ -1.86
CBX1P83916 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 RPL23AP57-201ENST00000332361 466 ntBASIC3.45□□□□□ -1.86
CBX1P83916 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CBX1P83916 RPL32P3-201ENST00000359025 275 ntBASIC3.45□□□□□ -1.86
CBX1P83916 Y_RNA.110-201ENST00000363220 99 ntBASIC3.45□□□□□ -1.86
CBX1P83916 RNU1-32P-201ENST00000363937 159 ntBASIC3.45□□□□□ -1.86
CBX1P83916 RNU6-353P-201ENST00000364266 108 ntBASIC3.45□□□□□ -1.86
CBX1P83916 RNU6-761P-201ENST00000384148 107 ntBASIC3.45□□□□□ -1.86
CBX1P83916 RPL31P1-201ENST00000398116 372 ntBASIC3.45□□□□□ -1.86
CBX1P83916 MTND4P13-201ENST00000402078 1023 ntBASIC3.45□□□□□ -1.86
CBX1P83916 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.45□□□□□ -1.86
CBX1P83916 RNU2-71P-201ENST00000411395 189 ntBASIC3.45□□□□□ -1.86
CBX1P83916 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 OR1AA1P-201ENST00000419597 916 ntBASIC3.45□□□□□ -1.86
CBX1P83916 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 HSFY1P1-201ENST00000423928 1178 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 CST9LP2-201ENST00000437612 320 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.45□□□□□ -1.86
CBX1P83916 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CBX1P83916 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 RPL21P104-201ENST00000464143 478 ntBASIC3.45□□□□□ -1.86
CBX1P83916 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CBX1P83916 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 HMGB1P22-201ENST00000505315 124 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AC118282.2-201ENST00000508739 374 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AC109471.1-201ENST00000511631 612 ntBASIC3.45□□□□□ -1.86
CBX1P83916 SNORA31.26-201ENST00000517250 137 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.45□□□□□ -1.86
CBX1P83916 LSM6P2-201ENST00000552208 177 ntBASIC3.45□□□□□ -1.86
CBX1P83916 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.45□□□□□ -1.86
CBX1P83916 AC010653.1-201ENST00000571108 881 ntBASIC3.45□□□□□ -1.86
CBX1P83916 MIR4700-201ENST00000578311 74 ntBASIC3.45□□□□□ -1.86
CBX1P83916 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.45□□□□□ -1.86
CBX1P83916 AL355812.1-201ENST00000603215 216 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AC008745.1-201ENST00000604064 271 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AC002487.1-201ENST00000604565 994 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AL023583.1-201ENST00000607518 1143 ntBASIC3.45□□□□□ -1.86
CBX1P83916 AL590282.1-201ENST00000610379 1136 ntBASIC3.45□□□□□ -1.86
CBX1P83916 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.45□□□□□ -1.86
CBX1P83916 AC091903.1-201ENST00000624322 454 ntBASIC3.45□□□□□ -1.86
CBX1P83916 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.45□□□□□ -1.86
CBX1P83916 BX649567.1-201ENST00000642071 1134 ntBASIC3.45□□□□□ -1.86
CBX1P83916 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.45□□□□□ -1.86
CBX1P83916 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CBX1P83916 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CBX1P83916 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.44□□□□□ -1.86
CBX1P83916 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
CBX1P83916 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CBX1P83916 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.44□□□□□ -1.86
CBX1P83916 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CBX1P83916 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 RNU6-549P-201ENST00000384433 107 ntBASIC3.44□□□□□ -1.86
CBX1P83916 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.44□□□□□ -1.86
CBX1P83916 OR6C69P-201ENST00000394268 893 ntBASIC3.44□□□□□ -1.86
CBX1P83916 TMSB4XP8-201ENST00000402089 135 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms