Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCL20P78556 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCL20P78556 RSL24D1P2-201ENST00000445584 366 ntBASIC2.32□□□□□ -2.04
CCL20P78556 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.32□□□□□ -2.04
CCL20P78556 MRPL35P4-201ENST00000453682 566 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AP000705.1-201ENST00000454567 350 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AC008571.1-201ENST00000467232 300 ntBASIC2.32□□□□□ -2.04
CCL20P78556 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.32□□□□□ -2.04
CCL20P78556 AC010301.1-201ENST00000473936 355 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AC087879.1-201ENST00000474343 374 ntBASIC2.32□□□□□ -2.04
CCL20P78556 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.32□□□□□ -2.04
CCL20P78556 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.32□□□□□ -2.04
CCL20P78556 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.32□□□□□ -2.04
CCL20P78556 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
CCL20P78556 AC004062.1-201ENST00000509926 645 ntBASIC2.32□□□□□ -2.04
CCL20P78556 TBCAP3-201ENST00000512475 312 ntBASIC2.32□□□□□ -2.04
CCL20P78556 RNU6-826P-201ENST00000516827 104 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AC010306.1-201ENST00000523223 1117 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AC239860.2-201ENST00000525886 270 ntBASIC2.32□□□□□ -2.04
CCL20P78556 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.32□□□□□ -2.04
CCL20P78556 AL133271.1-201ENST00000538229 291 ntBASIC2.32□□□□□ -2.04
CCL20P78556 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.32□□□□□ -2.04
CCL20P78556 GTF2IP22-201ENST00000554443 182 ntBASIC2.32□□□□□ -2.04
CCL20P78556 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCL20P78556 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 AC006130.2-201ENST00000586202 326 ntBASIC2.32□□□□□ -2.04
CCL20P78556 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCL20P78556 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 AL110115.1-201ENST00000614396 364 ntBASIC2.32□□□□□ -2.04
CCL20P78556 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.32□□□□□ -2.04
CCL20P78556 AC010338.1-201ENST00000621823 717 ntBASIC2.32□□□□□ -2.04
CCL20P78556 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.32□□□□□ -2.04
CCL20P78556 U6.107-201ENST00000637108 79 ntBASIC2.32□□□□□ -2.04
CCL20P78556 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCL20P78556 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCL20P78556 Z83843.1-201ENST00000604070 3685 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AP002907.1-201ENST00000606361 1430 ntBASIC2.32□□□□□ -2.04
CCL20P78556 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCL20P78556 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.32□□□□□ -2.04
CCL20P78556 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.31□□□□□ -2.04
CCL20P78556 SNORA25.6-201ENST00000364121 118 ntBASIC2.31□□□□□ -2.04
CCL20P78556 Y_RNA.493-201ENST00000384422 102 ntBASIC2.31□□□□□ -2.04
CCL20P78556 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.31□□□□□ -2.04
CCL20P78556 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCL20P78556 SFR1P1-201ENST00000403720 688 ntBASIC2.31□□□□□ -2.04
CCL20P78556 RPL7P25-201ENST00000404151 721 ntBASIC2.31□□□□□ -2.04
CCL20P78556 Z86062.1-201ENST00000406773 777 ntBASIC2.31□□□□□ -2.04
CCL20P78556 DHFRP5-201ENST00000406944 564 ntBASIC2.31□□□□□ -2.04
CCL20P78556 RNU6-1077P-201ENST00000410506 102 ntBASIC2.31□□□□□ -2.04
CCL20P78556 RPL7P8-201ENST00000411964 730 ntBASIC2.31□□□□□ -2.04
CCL20P78556 RPL26P29-201ENST00000415623 438 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.31□□□□□ -2.04
CCL20P78556 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.31□□□□□ -2.04
CCL20P78556 BX842559.1-201ENST00000419615 532 ntBASIC2.31□□□□□ -2.04
CCL20P78556 EIF2S2P3-201ENST00000428356 999 ntBASIC2.31□□□□□ -2.04
CCL20P78556 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.31□□□□□ -2.04
CCL20P78556 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.31□□□□□ -2.04
CCL20P78556 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC2.31□□□□□ -2.04
CCL20P78556 AC233982.1-201ENST00000451247 436 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.31□□□□□ -2.04
CCL20P78556 AL590639.1-201ENST00000456484 337 ntBASIC2.31□□□□□ -2.04
CCL20P78556 RPS23P3-201ENST00000470993 430 ntBASIC2.31□□□□□ -2.04
CCL20P78556 RPS29P2-201ENST00000479278 136 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC068724.1-201ENST00000487100 792 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC026979.1-201ENST00000492525 396 ntBASIC2.31□□□□□ -2.04
CCL20P78556 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.31□□□□□ -2.04
CCL20P78556 AC104619.4-201ENST00000510773 249 ntBASIC2.31□□□□□ -2.04
CCL20P78556 MIR2116-201ENST00000517221 80 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.31□□□□□ -2.04
CCL20P78556 HMGB1P41-201ENST00000520234 440 ntBASIC2.31□□□□□ -2.04
CCL20P78556 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.31□□□□□ -2.04
CCL20P78556 CR383656.14-201ENST00000551951 406 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC090312.2-201ENST00000582687 378 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.31□□□□□ -2.04
CCL20P78556 AL356575.1-201ENST00000603008 283 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC022387.2-201ENST00000604050 448 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC008962.1-201ENST00000605729 304 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC242628.1-201ENST00000606810 391 ntBASIC2.31□□□□□ -2.04
CCL20P78556 AC105227.2-201ENST00000615075 605 ntBASIC2.31□□□□□ -2.04
CCL20P78556 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CCL20P78556 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCL20P78556 AL645568.2-201ENST00000432815 1337 ntBASIC2.31□□□□□ -2.04
CCL20P78556 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCL20P78556 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CCL20P78556 AC010733.2-201ENST00000589496 5702 ntBASIC2.31□□□□□ -2.04
CCL20P78556 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCL20P78556 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.3□□□□□ -2.04
CCL20P78556 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCL20P78556 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCL20P78556 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CCL20P78556 MT-TC-201ENST00000387405 66 ntBASIC2.3□□□□□ -2.04
CCL20P78556 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCL20P78556 RPL21P17-201ENST00000397467 475 ntBASIC2.3□□□□□ -2.04
CCL20P78556 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.3□□□□□ -2.04
CCL20P78556 AL512504.1-201ENST00000415494 778 ntBASIC2.3□□□□□ -2.04
CCL20P78556 RPL7P10-201ENST00000417407 739 ntBASIC2.3□□□□□ -2.04
CCL20P78556 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.3□□□□□ -2.04
CCL20P78556 AC233728.2-201ENST00000425348 757 ntBASIC2.3□□□□□ -2.04
CCL20P78556 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms