Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC053481.1-201ENST00000467217 306 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 HMGB1P25-201ENST00000468402 607 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC139783.2-201ENST00000504847 1145 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CL1P78423 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC093677.1-201ENST00000514414 678 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CL1P78423 OR5AP1P-201ENST00000529730 940 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CL1P78423 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AP001004.1-201ENST00000582468 324 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC005255.1-201ENST00000593748 216 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CX3CL1P78423 MTCYBP22-201ENST00000603788 447 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC114878.2-201ENST00000604863 1251 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AL451044.1-201ENST00000604867 238 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AL160290.3-201ENST00000604869 165 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 Z98200.1-201ENST00000607298 470 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC107214.2-201ENST00000608204 634 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AL031666.3-201ENST00000609320 1006 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC019193.2-201ENST00000610012 634 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 MIR7844-201ENST00000616161 122 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 MIR6891-201ENST00000618788 93 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC103858.2-201ENST00000621471 543 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AC127502.3-201ENST00000636170 1206 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CL1P78423 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CL1P78423 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CX3CL1P78423 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CL1P78423 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CL1P78423 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CX3CL1P78423 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CL1P78423 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CL1P78423 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CL1P78423 MIR3065-201ENST00000390137 79 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CX3CL1P78423 RNU6-837P-201ENST00000391056 108 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 MIR1302-8-201ENST00000408342 128 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 MIR320C1-201ENST00000408566 88 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 RN7SKP266-201ENST00000410232 287 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 SNORA74C-2-201ENST00000411179 201 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 TPMTP3-201ENST00000411928 735 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 HMGB1P11-201ENST00000413899 637 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC016769.2-201ENST00000414815 475 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 AC092647.1-201ENST00000420654 287 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CL1P78423 AL391219.1-201ENST00000422570 483 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CL1P78423 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.5□□□□□ -1.85
CX3CL1P78423 LARP1BP3-201ENST00000437229 869 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 UBE2V1P3-201ENST00000439651 417 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC114495.1-201ENST00000441274 436 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CL1P78423 Z95327.1-201ENST00000446082 482 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 RPS29P33-201ENST00000456717 146 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC010468.1-201ENST00000461022 817 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC091564.1-201ENST00000464563 479 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 RPS4XP10-201ENST00000465034 731 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CL1P78423 RN7SL812P-201ENST00000493791 279 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 RPL5P23-201ENST00000496040 868 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 OR2A20P-203ENST00000498397 1268 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 MTND5P4-201ENST00000514978 288 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 Vault.1-201ENST00000516474 102 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 CDH12P4-201ENST00000517835 295 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 CDH12P3-201ENST00000517935 295 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 CDH12P1-201ENST00000518435 295 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 OR4P1P-201ENST00000530808 1136 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC091515.1-201ENST00000548110 679 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CL1P78423 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CL1P78423 AC234771.5-201ENST00000600161 514 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC010620.1-201ENST00000601088 1102 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC079587.1-201ENST00000603846 277 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 Z94722.1-201ENST00000604328 474 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 BX323046.1-201ENST00000610145 535 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.5□□□□□ -1.85
CX3CL1P78423 AL596245.1-201ENST00000618994 362 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC026422.1-201ENST00000623961 452 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 AC091965.5-201ENST00000624785 342 ntBASIC3.5□□□□□ -1.85
CX3CL1P78423 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.5□□□□□ -1.85
CX3CL1P78423 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CX3CL1P78423 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.5□□□□□ -1.85
CX3CL1P78423 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms