Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL096701.2-201ENST00000416920 238 ntBASIC2.55□□□□□ -2
UBA52P62987 AC104332.2-201ENST00000429959 156 ntBASIC2.55□□□□□ -2
UBA52P62987 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.55□□□□□ -2
UBA52P62987 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
UBA52P62987 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.55□□□□□ -2
UBA52P62987 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
UBA52P62987 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.55□□□□□ -2
UBA52P62987 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.55□□□□□ -2
UBA52P62987 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.55□□□□□ -2
UBA52P62987 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.55□□□□□ -2
UBA52P62987 AC107016.2-201ENST00000547968 190 ntBASIC2.55□□□□□ -2
UBA52P62987 SETP2-201ENST00000553886 926 ntBASIC2.55□□□□□ -2
UBA52P62987 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.55□□□□□ -2
UBA52P62987 AP005205.1-201ENST00000563503 508 ntBASIC2.55□□□□□ -2
UBA52P62987 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.55□□□□□ -2
UBA52P62987 MIR2682-201ENST00000580305 110 ntBASIC2.55□□□□□ -2
UBA52P62987 UBL5P2-201ENST00000583788 219 ntBASIC2.55□□□□□ -2
UBA52P62987 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
UBA52P62987 AC015849.2-201ENST00000605738 409 ntBASIC2.55□□□□□ -2
UBA52P62987 OR2AS2P-201ENST00000606902 342 ntBASIC2.55□□□□□ -2
UBA52P62987 AC231759.1-201ENST00000616455 597 ntBASIC2.55□□□□□ -2
UBA52P62987 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.55□□□□□ -2
UBA52P62987 AC002076.2-201ENST00000617362 122 ntBASIC2.55□□□□□ -2
UBA52P62987 AC099506.2-201ENST00000623074 221 ntBASIC2.55□□□□□ -2
UBA52P62987 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.55□□□□□ -2
UBA52P62987 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.55□□□□□ -2
UBA52P62987 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.55□□□□□ -2
UBA52P62987 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UBA52P62987 AC000403.1-201ENST00000613696 3585 ntBASIC2.54□□□□□ -2
UBA52P62987 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
UBA52P62987 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.54□□□□□ -2
UBA52P62987 RPL9P7-201ENST00000330965 580 ntBASIC2.54□□□□□ -2
UBA52P62987 NACA3P-201ENST00000359690 648 ntBASIC2.54□□□□□ -2
UBA52P62987 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UBA52P62987 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.54□□□□□ -2
UBA52P62987 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.54□□□□□ -2
UBA52P62987 ELOCP6-201ENST00000429066 328 ntBASIC2.54□□□□□ -2
UBA52P62987 ELOCP23-201ENST00000452014 332 ntBASIC2.54□□□□□ -2
UBA52P62987 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.54□□□□□ -2
UBA52P62987 ELOCP12-201ENST00000458706 328 ntBASIC2.54□□□□□ -2
UBA52P62987 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.54□□□□□ -2
UBA52P62987 RN7SL297P-201ENST00000483161 293 ntBASIC2.54□□□□□ -2
UBA52P62987 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.54□□□□□ -2
UBA52P62987 AC026801.2-201ENST00000515352 425 ntBASIC2.54□□□□□ -2
UBA52P62987 AC009812.2-201ENST00000517657 457 ntBASIC2.54□□□□□ -2
UBA52P62987 SEC11B-201ENST00000518383 499 ntBASIC2.54□□□□□ -2
UBA52P62987 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.54□□□□□ -2
UBA52P62987 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
UBA52P62987 AC087888.1-201ENST00000550884 1254 ntBASIC2.54□□□□□ -2
UBA52P62987 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
UBA52P62987 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
UBA52P62987 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
UBA52P62987 YWHAQP7-201ENST00000603536 658 ntBASIC2.54□□□□□ -2
UBA52P62987 RNA5SP108-201ENST00000605921 117 ntBASIC2.54□□□□□ -2
UBA52P62987 AP003117.2-201ENST00000606010 545 ntBASIC2.54□□□□□ -2
UBA52P62987 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.54□□□□□ -2
UBA52P62987 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
UBA52P62987 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
UBA52P62987 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.54□□□□□ -2
UBA52P62987 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.53□□□□□ -2
UBA52P62987 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
UBA52P62987 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.53□□□□□ -2
UBA52P62987 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
UBA52P62987 OR1S2-201ENST00000302592 978 ntBASIC2.53□□□□□ -2
UBA52P62987 SNORA71.1-201ENST00000364523 117 ntBASIC2.53□□□□□ -2
UBA52P62987 RNU6-225P-201ENST00000384613 103 ntBASIC2.53□□□□□ -2
UBA52P62987 RPL7P10-201ENST00000417407 739 ntBASIC2.53□□□□□ -2
UBA52P62987 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.53□□□□□ -2
UBA52P62987 AL160175.1-201ENST00000428124 247 ntBASIC2.53□□□□□ -2
UBA52P62987 RPL21P40-201ENST00000428586 483 ntBASIC2.53□□□□□ -2
UBA52P62987 MTCO3P21-201ENST00000430791 643 ntBASIC2.53□□□□□ -2
UBA52P62987 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.53□□□□□ -2
UBA52P62987 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.53□□□□□ -2
UBA52P62987 AC005002.1-201ENST00000447458 540 ntBASIC2.53□□□□□ -2
UBA52P62987 NPM1P49-201ENST00000448027 714 ntBASIC2.53□□□□□ -2
UBA52P62987 AP000705.1-201ENST00000454567 350 ntBASIC2.53□□□□□ -2
UBA52P62987 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.53□□□□□ -2
UBA52P62987 AC004924.1-201ENST00000480160 781 ntBASIC2.53□□□□□ -2
UBA52P62987 AC016687.1-201ENST00000482574 353 ntBASIC2.53□□□□□ -2
UBA52P62987 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.53□□□□□ -2
UBA52P62987 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.53□□□□□ -2
UBA52P62987 AC010374.2-201ENST00000512933 535 ntBASIC2.53□□□□□ -2
UBA52P62987 RNU6-943P-201ENST00000516960 98 ntBASIC2.53□□□□□ -2
UBA52P62987 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.53□□□□□ -2
UBA52P62987 AP000857.1-201ENST00000532151 543 ntBASIC2.53□□□□□ -2
UBA52P62987 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.53□□□□□ -2
UBA52P62987 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
UBA52P62987 MIR4672-201ENST00000583126 81 ntBASIC2.53□□□□□ -2
UBA52P62987 AC005242.1-201ENST00000585658 438 ntBASIC2.53□□□□□ -2
UBA52P62987 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.53□□□□□ -2
UBA52P62987 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
UBA52P62987 AL020991.1-201ENST00000612314 373 ntBASIC2.53□□□□□ -2
UBA52P62987 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.53□□□□□ -2
UBA52P62987 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.53□□□□□ -2
UBA52P62987 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UBA52P62987 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
UBA52P62987 AC002546.1-201ENST00000588041 2504 ntBASIC2.52□□□□□ -2.01
UBA52P62987 MTND4P34-201ENST00000572715 1371 ntBASIC2.52□□□□□ -2.01
UBA52P62987 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
UBA52P62987 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms