Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.79□□□□□ -1.96
LSM6P62312 AC090617.7-201ENST00000623952 126 ntBASIC2.79□□□□□ -1.96
LSM6P62312 AC084035.1-201ENST00000634543 607 ntBASIC2.79□□□□□ -1.96
LSM6P62312 U6.105-201ENST00000637379 88 ntBASIC2.79□□□□□ -1.96
LSM6P62312 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
LSM6P62312 MTND5P24-201ENST00000438892 1767 ntBASIC2.79□□□□□ -1.96
LSM6P62312 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM6P62312 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM6P62312 AC107081.3-201ENST00000612715 2034 ntBASIC2.78□□□□□ -1.96
LSM6P62312 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LSM6P62312 AL122126.1-201ENST00000546905 1318 ntBASIC2.78□□□□□ -1.96
LSM6P62312 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM6P62312 U3.6-201ENST00000363622 211 ntBASIC2.78□□□□□ -1.96
LSM6P62312 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LSM6P62312 U3.19-201ENST00000390893 196 ntBASIC2.78□□□□□ -1.96
LSM6P62312 RPL21P3-201ENST00000395517 478 ntBASIC2.78□□□□□ -1.96
LSM6P62312 ATP5F1P3-201ENST00000397213 657 ntBASIC2.78□□□□□ -1.96
LSM6P62312 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.78□□□□□ -1.96
LSM6P62312 RNF19BPX-201ENST00000426224 625 ntBASIC2.78□□□□□ -1.96
LSM6P62312 UBE2V1P1-201ENST00000430836 445 ntBASIC2.78□□□□□ -1.96
LSM6P62312 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
LSM6P62312 HMGB3P6-201ENST00000444896 598 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC069540.1-201ENST00000446320 988 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC146507.2-201ENST00000460608 476 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC087879.1-201ENST00000474343 374 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC017015.1-201ENST00000477387 286 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC109925.1-201ENST00000478069 331 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.78□□□□□ -1.96
LSM6P62312 AC016065.2-201ENST00000514530 444 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM6P62312 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM6P62312 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.78□□□□□ -1.96
LSM6P62312 AL157394.1-201ENST00000562983 1224 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC107954.1-201ENST00000565906 727 ntBASIC2.78□□□□□ -1.96
LSM6P62312 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM6P62312 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.78□□□□□ -1.96
LSM6P62312 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LSM6P62312 AC138932.5-201ENST00000617759 563 ntBASIC2.78□□□□□ -1.96
LSM6P62312 MIR7975-201ENST00000619350 68 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC091046.2-201ENST00000620775 665 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AL356490.1-201ENST00000623079 479 ntBASIC2.78□□□□□ -1.96
LSM6P62312 AC024023.1-201ENST00000624530 922 ntBASIC2.78□□□□□ -1.96
LSM6P62312 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM6P62312 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM6P62312 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM6P62312 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.78□□□□□ -1.96
LSM6P62312 AC093908.1-201ENST00000623125 8092 ntBASIC2.78□□□□□ -1.97
LSM6P62312 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LSM6P62312 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
LSM6P62312 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.77□□□□□ -1.97
LSM6P62312 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LSM6P62312 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LSM6P62312 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
LSM6P62312 AC063979.1-201ENST00000415539 377 ntBASIC2.77□□□□□ -1.97
LSM6P62312 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM6P62312 AC104332.2-201ENST00000429959 156 ntBASIC2.77□□□□□ -1.97
LSM6P62312 YWHAZP7-201ENST00000436906 631 ntBASIC2.77□□□□□ -1.97
LSM6P62312 PRDX3P3-201ENST00000447765 522 ntBASIC2.77□□□□□ -1.97
LSM6P62312 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
LSM6P62312 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.77□□□□□ -1.97
LSM6P62312 AC104472.2-201ENST00000469035 601 ntBASIC2.77□□□□□ -1.97
LSM6P62312 AC010285.1-201ENST00000470580 392 ntBASIC2.77□□□□□ -1.97
LSM6P62312 RPS23P3-201ENST00000470993 430 ntBASIC2.77□□□□□ -1.97
LSM6P62312 WBP1LP4-201ENST00000505043 344 ntBASIC2.77□□□□□ -1.97
LSM6P62312 AC111000.2-201ENST00000507775 550 ntBASIC2.77□□□□□ -1.97
LSM6P62312 AC002456.2-201ENST00000509356 380 ntBASIC2.77□□□□□ -1.97
LSM6P62312 MTCYBP37-201ENST00000510642 1133 ntBASIC2.77□□□□□ -1.97
LSM6P62312 AC008494.2-201ENST00000514544 370 ntBASIC2.77□□□□□ -1.97
LSM6P62312 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.77□□□□□ -1.97
LSM6P62312 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.77□□□□□ -1.97
LSM6P62312 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
LSM6P62312 CCNG2P1-201ENST00000549521 1000 ntBASIC2.77□□□□□ -1.97
LSM6P62312 RN7SL339P-201ENST00000580597 296 ntBASIC2.77□□□□□ -1.97
LSM6P62312 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM6P62312 NTAN1P1-201ENST00000603150 646 ntBASIC2.77□□□□□ -1.97
LSM6P62312 ELOCP35-201ENST00000604289 336 ntBASIC2.77□□□□□ -1.97
LSM6P62312 AL627309.6-201ENST00000606857 840 ntBASIC2.77□□□□□ -1.97
LSM6P62312 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM6P62312 AL110115.1-201ENST00000614396 364 ntBASIC2.77□□□□□ -1.97
LSM6P62312 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.77□□□□□ -1.97
LSM6P62312 AP003122.6-201ENST00000623831 495 ntBASIC2.77□□□□□ -1.97
LSM6P62312 MIR622-201ENST00000638396 96 ntBASIC2.77□□□□□ -1.97
LSM6P62312 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LSM6P62312 MTND5P28-201ENST00000438005 1594 ntBASIC2.77□□□□□ -1.97
LSM6P62312 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LSM6P62312 MAPK10-322ENST00000641485 4530 ntBASIC2.76□□□□□ -1.97
LSM6P62312 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM6P62312 RNU6-629P-201ENST00000384061 103 ntBASIC2.76□□□□□ -1.97
LSM6P62312 MIR7-3-201ENST00000384898 110 ntBASIC2.76□□□□□ -1.97
LSM6P62312 SNORA26.7-201ENST00000391288 122 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AL357075.1-201ENST00000404107 726 ntBASIC2.76□□□□□ -1.97
LSM6P62312 PRRC2CP1-201ENST00000404428 159 ntBASIC2.76□□□□□ -1.97
LSM6P62312 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.76□□□□□ -1.97
LSM6P62312 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
LSM6P62312 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM6P62312 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LSM6P62312 ATG3P1-201ENST00000419507 911 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM6P62312 ARL4AP4-201ENST00000434170 518 ntBASIC2.76□□□□□ -1.97
LSM6P62312 SETP8-201ENST00000435341 628 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms