Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC017100.2-201ENST00000584628 355 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC107982.3-201ENST00000584957 985 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC005255.1-201ENST00000593748 216 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.36□□□□□ -1.87
LMO4P61968 AC010680.3-201ENST00000604215 520 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 AC069545.1-201ENST00000605671 358 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AL391497.1-201ENST00000608671 547 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AL359535.1-201ENST00000612100 1087 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC023158.2-201ENST00000614876 543 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AP005264.7-201ENST00000625003 745 ntBASIC3.36□□□□□ -1.87
LMO4P61968 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 DCAF13P3-201ENST00000561147 1334 ntBASIC3.36□□□□□ -1.87
LMO4P61968 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LMO4P61968 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 Y_RNA.516-201ENST00000384541 124 ntBASIC3.35□□□□□ -1.87
LMO4P61968 RNU6-1151P-201ENST00000384684 107 ntBASIC3.35□□□□□ -1.87
LMO4P61968 RNA5SP372-201ENST00000390836 115 ntBASIC3.35□□□□□ -1.87
LMO4P61968 DEFB108C-201ENST00000400154 252 ntBASIC3.35□□□□□ -1.87
LMO4P61968 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 USP9YP33-201ENST00000412220 421 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.35□□□□□ -1.87
LMO4P61968 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.35□□□□□ -1.87
LMO4P61968 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AL009174.1-201ENST00000426577 416 ntBASIC3.35□□□□□ -1.87
LMO4P61968 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.35□□□□□ -1.87
LMO4P61968 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 AC007389.2-201ENST00000434630 306 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC092641.1-201ENST00000440229 772 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.35□□□□□ -1.87
LMO4P61968 HMGB1P16-201ENST00000447155 540 ntBASIC3.35□□□□□ -1.87
LMO4P61968 RPS11P1-201ENST00000451072 473 ntBASIC3.35□□□□□ -1.87
LMO4P61968 KATNBL1P6-201ENST00000453433 915 ntBASIC3.35□□□□□ -1.87
LMO4P61968 RAD23BP3-201ENST00000454157 1152 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.35□□□□□ -1.87
LMO4P61968 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.35□□□□□ -1.87
LMO4P61968 RPS27P23-201ENST00000487608 251 ntBASIC3.35□□□□□ -1.87
LMO4P61968 DEFB109F-201ENST00000491870 277 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AP002812.1-201ENST00000495378 474 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC113430.1-201ENST00000506872 718 ntBASIC3.35□□□□□ -1.87
LMO4P61968 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 AC109445.1-201ENST00000512356 383 ntBASIC3.35□□□□□ -1.87
LMO4P61968 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 RNU6-488P-201ENST00000515918 99 ntBASIC3.35□□□□□ -1.87
LMO4P61968 RNU7-143P-201ENST00000516781 65 ntBASIC3.35□□□□□ -1.87
LMO4P61968 RNU6-678P-201ENST00000516832 109 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 AL139174.1-201ENST00000531489 886 ntBASIC3.35□□□□□ -1.87
LMO4P61968 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LMO4P61968 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.35□□□□□ -1.87
LMO4P61968 AC091516.1-201ENST00000549191 703 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 AC007954.1-201ENST00000554198 494 ntBASIC3.35□□□□□ -1.87
LMO4P61968 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.35□□□□□ -1.87
LMO4P61968 AGGF1P8-201ENST00000562979 1000 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC124068.1-201ENST00000563131 678 ntBASIC3.35□□□□□ -1.87
LMO4P61968 ROCK1P1-201ENST00000573767 549 ntBASIC3.35□□□□□ -1.87
LMO4P61968 MIR5685-201ENST00000579080 79 ntBASIC3.35□□□□□ -1.87
LMO4P61968 BPTFP1-201ENST00000579209 492 ntBASIC3.35□□□□□ -1.87
LMO4P61968 MIR4429-201ENST00000580105 73 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC233702.9-201ENST00000581528 203 ntBASIC3.35□□□□□ -1.87
LMO4P61968 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.35□□□□□ -1.87
LMO4P61968 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.35□□□□□ -1.87
LMO4P61968 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 AC087683.1-201ENST00000591187 441 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC008687.2-201ENST00000597865 520 ntBASIC3.35□□□□□ -1.87
LMO4P61968 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.35□□□□□ -1.87
LMO4P61968 AC079089.3-201ENST00000603094 673 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC103881.1-201ENST00000603476 538 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AL592436.1-201ENST00000605135 558 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AL592221.1-201ENST00000605266 382 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AP003117.2-201ENST00000606010 545 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC108747.1-201ENST00000609508 535 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC064801.1-201ENST00000612025 407 ntBASIC3.35□□□□□ -1.87
LMO4P61968 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LMO4P61968 AC087241.4-201ENST00000612441 480 ntBASIC3.35□□□□□ -1.87
LMO4P61968 AC025588.4-201ENST00000615802 908 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms