Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 HSFY1P1-201ENST00000423928 1178 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AC006548.1-201ENST00000427470 102 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AC004975.1-201ENST00000428733 208 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AL445584.1-201ENST00000431451 330 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 RBMY2UP-201ENST00000453474 324 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 ACTR3P3-201ENST00000480448 893 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN12P56749 AC021678.1-201ENST00000505195 936 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN12P56749 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 IGKV2D-36-201ENST00000518643 226 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 HMGB1P23-201ENST00000518743 568 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 HAUS1P3-201ENST00000523909 662 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN12P56749 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN12P56749 MIR4276-201ENST00000584832 70 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 U3.45-201ENST00000607547 219 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 uc_338.25-201ENST00000613756 156 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AL354976.1-201ENST00000613843 387 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AL157817.1-201ENST00000614264 790 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AL121772.2-201ENST00000614331 297 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AC018755.4-201ENST00000619715 454 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN12P56749 CR381572.1-201ENST00000625098 102 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 AC084035.1-201ENST00000634543 607 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
CLDN12P56749 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN12P56749 ZNF807-201ENST00000328088 1707 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLDN12P56749 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN12P56749 AL353743.1-202ENST00000431724 1695 ntBASIC2.73□□□□□ -1.97
CLDN12P56749 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CLDN12P56749 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN12P56749 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN12P56749 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN12P56749 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN12P56749 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN12P56749 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN12P56749 RPL5P18-201ENST00000406671 891 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 RN7SKP58-201ENST00000411010 305 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN12P56749 YWHAZP7-201ENST00000436906 631 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 YWHAZP8-201ENST00000436935 731 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC004865.1-201ENST00000442276 1003 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC140076.1-201ENST00000449897 361 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN12P56749 NUTF2P7-201ENST00000453086 375 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AL445669.2-201ENST00000454425 421 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC103987.1-201ENST00000473394 348 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 RPS26P21-201ENST00000475397 348 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC017015.1-201ENST00000477387 286 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 GAPDHP39-201ENST00000481866 979 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN12P56749 RNU1-95P-201ENST00000516357 160 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 RNU1-128P-201ENST00000516704 160 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN12P56749 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC027104.1-201ENST00000563702 681 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC125494.3-201ENST00000602759 455 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN12P56749 AC022509.4-201ENST00000621404 572 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC068620.4-201ENST00000636730 1182 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 AC017104.5-201ENST00000637647 639 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 LRRC77P-213ENST00000637727 880 ntBASIC2.72□□□□□ -1.97
CLDN12P56749 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN12P56749 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN12P56749 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN12P56749 AC108206.1-201ENST00000570186 4159 ntBASIC2.71□□□□□ -1.97
CLDN12P56749 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN12P56749 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN12P56749 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN12P56749 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN12P56749 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN12P56749 RNA5SP124-201ENST00000362739 110 ntBASIC2.71□□□□□ -1.98
CLDN12P56749 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.71□□□□□ -1.98
CLDN12P56749 SNORA5A-201ENST00000384111 134 ntBASIC2.71□□□□□ -1.98
CLDN12P56749 AC092745.2-202ENST00000411880 369 ntBASIC2.71□□□□□ -1.98
CLDN12P56749 AC063979.1-201ENST00000415539 377 ntBASIC2.71□□□□□ -1.98
CLDN12P56749 HSFY4P-201ENST00000415994 1181 ntBASIC2.71□□□□□ -1.98
CLDN12P56749 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN12P56749 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN12P56749 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN12P56749 MTND2P21-201ENST00000436242 1042 ntBASIC2.71□□□□□ -1.98
CLDN12P56749 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms