Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-583P-201ENST00000516012 92 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RNA5SP315-201ENST00000516340 116 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RNA5SP519-201ENST00000516480 119 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RN7SKP82-201ENST00000516786 223 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RNA5SP312-201ENST00000517068 116 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH11P55287 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 AL512347.1-201ENST00000566420 503 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC009101.1-201ENST00000568135 242 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 AC090616.2-202ENST00000584248 222 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH11P55287 AC020914.4-201ENST00000597690 277 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AL109653.1-201ENST00000603091 248 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 MIR486-1-201ENST00000612171 68 ntBASIC3.71□□□□□ -1.82
CDH11P55287 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AC068722.2-201ENST00000618734 544 ntBASIC3.71□□□□□ -1.82
CDH11P55287 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 AC092184.1-201ENST00000625042 715 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 MIR3974-201ENST00000637126 96 ntBASIC3.71□□□□□ -1.82
CDH11P55287 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 FAM157B-203ENST00000639350 358 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.82
CDH11P55287 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 AC095050.2-201ENST00000510748 1458 ntBASIC3.71□□□□□ -1.82
CDH11P55287 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 AC027287.1-201ENST00000553115 1453 ntBASIC3.71□□□□□ -1.82
CDH11P55287 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH11P55287 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH11P55287 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 AL122126.1-201ENST00000546905 1318 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AL139811.1-201ENST00000424779 2299 ntBASIC3.7□□□□□ -1.82
CDH11P55287 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDH11P55287 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH11P55287 RNU1-14P-201ENST00000362759 152 ntBASIC3.7□□□□□ -1.82
CDH11P55287 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
CDH11P55287 SNORA51.6-201ENST00000384151 125 ntBASIC3.7□□□□□ -1.82
CDH11P55287 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDH11P55287 ENSAP1-201ENST00000392855 326 ntBASIC3.7□□□□□ -1.82
CDH11P55287 ARF4P3-201ENST00000397387 509 ntBASIC3.7□□□□□ -1.82
CDH11P55287 RN7SKP235-201ENST00000410662 305 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC073264.1-201ENST00000411508 416 ntBASIC3.7□□□□□ -1.82
CDH11P55287 TPT1P2-201ENST00000413105 503 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.7□□□□□ -1.82
CDH11P55287 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 AL645939.1-201ENST00000453429 797 ntBASIC3.7□□□□□ -1.82
CDH11P55287 MTCO3P11-201ENST00000455103 774 ntBASIC3.7□□□□□ -1.82
CDH11P55287 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 AL122001.1-201ENST00000457027 370 ntBASIC3.7□□□□□ -1.82
CDH11P55287 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDH11P55287 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 OR4G11P-201ENST00000492842 939 ntBASIC3.7□□□□□ -1.82
CDH11P55287 RN7SL691P-201ENST00000494487 301 ntBASIC3.7□□□□□ -1.82
CDH11P55287 RPS27AP13-201ENST00000498403 237 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 LTV1P1-201ENST00000510683 1237 ntBASIC3.7□□□□□ -1.82
CDH11P55287 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDH11P55287 KCTD9P2-201ENST00000512203 1013 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC010342.1-201ENST00000514047 877 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 AC022790.1-201ENST00000522872 204 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 DEFB131D-201ENST00000526803 184 ntBASIC3.7□□□□□ -1.82
CDH11P55287 ZNF705CP-201ENST00000530515 889 ntBASIC3.7□□□□□ -1.82
CDH11P55287 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 AC084824.1-201ENST00000550917 1005 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.7□□□□□ -1.82
CDH11P55287 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.7□□□□□ -1.82
CDH11P55287 BNIP3P5-201ENST00000562290 498 ntBASIC3.7□□□□□ -1.82
CDH11P55287 RPL23AP87-202ENST00000573039 466 ntBASIC3.7□□□□□ -1.82
CDH11P55287 LARP7P2-201ENST00000575306 125 ntBASIC3.7□□□□□ -1.82
CDH11P55287 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.7□□□□□ -1.82
CDH11P55287 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 VN1R79P-201ENST00000593540 513 ntBASIC3.7□□□□□ -1.82
CDH11P55287 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.7□□□□□ -1.82
CDH11P55287 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 667.4 ms