Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPS3AP14-201ENST00000483907 780 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC096576.1-201ENST00000489014 359 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC020893.1-201ENST00000502452 580 ntBASIC3.82□□□□□ -1.8
VCPP55072 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.82□□□□□ -1.8
VCPP55072 AC104108.1-201ENST00000509930 412 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.82□□□□□ -1.8
VCPP55072 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.82□□□□□ -1.8
VCPP55072 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.82□□□□□ -1.8
VCPP55072 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.82□□□□□ -1.8
VCPP55072 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.82□□□□□ -1.8
VCPP55072 OR5AP1P-201ENST00000529730 940 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC068339.2-201ENST00000534395 618 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.82□□□□□ -1.8
VCPP55072 CYP2C60P-201ENST00000566088 139 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC095057.3-201ENST00000567102 1157 ntBASIC3.82□□□□□ -1.8
VCPP55072 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.82□□□□□ -1.8
VCPP55072 AC104072.1-201ENST00000568817 668 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.82□□□□□ -1.8
VCPP55072 AC104984.5-201ENST00000586878 94 ntBASIC3.82□□□□□ -1.8
VCPP55072 AL136370.1-201ENST00000608166 691 ntBASIC3.82□□□□□ -1.8
VCPP55072 MIR6715A-201ENST00000615929 79 ntBASIC3.82□□□□□ -1.8
VCPP55072 MIR7112-201ENST00000616126 65 ntBASIC3.82□□□□□ -1.8
VCPP55072 AC103798.2-201ENST00000624292 632 ntBASIC3.82□□□□□ -1.8
VCPP55072 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.82□□□□□ -1.8
VCPP55072 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VCPP55072 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VCPP55072 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VCPP55072 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
VCPP55072 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VCPP55072 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VCPP55072 SNORD9-201ENST00000362566 104 ntBASIC3.81□□□□□ -1.8
VCPP55072 RNA5SP126-201ENST00000365092 109 ntBASIC3.81□□□□□ -1.8
VCPP55072 RNU6-468P-201ENST00000384003 109 ntBASIC3.81□□□□□ -1.8
VCPP55072 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VCPP55072 UBE2V1P2-201ENST00000397758 440 ntBASIC3.81□□□□□ -1.8
VCPP55072 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
VCPP55072 AC069282.1-201ENST00000411911 526 ntBASIC3.81□□□□□ -1.8
VCPP55072 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.81□□□□□ -1.8
VCPP55072 AC012497.1-201ENST00000429392 575 ntBASIC3.81□□□□□ -1.8
VCPP55072 HMGB1P45-201ENST00000435986 653 ntBASIC3.81□□□□□ -1.8
VCPP55072 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.81□□□□□ -1.8
VCPP55072 AL645931.1-201ENST00000439737 410 ntBASIC3.81□□□□□ -1.8
VCPP55072 HSFY3P-201ENST00000444242 1191 ntBASIC3.81□□□□□ -1.8
VCPP55072 Z77249.1-201ENST00000444622 1175 ntBASIC3.81□□□□□ -1.8
VCPP55072 GXYLT1P1-201ENST00000446657 490 ntBASIC3.81□□□□□ -1.8
VCPP55072 AL671855.1-201ENST00000446875 1203 ntBASIC3.81□□□□□ -1.8
VCPP55072 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.81□□□□□ -1.8
VCPP55072 RPS17P11-201ENST00000474297 293 ntBASIC3.81□□□□□ -1.8
VCPP55072 AL049830.2-201ENST00000480072 201 ntBASIC3.81□□□□□ -1.8
VCPP55072 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.81□□□□□ -1.8
VCPP55072 AC073522.1-201ENST00000483312 377 ntBASIC3.81□□□□□ -1.8
VCPP55072 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.81□□□□□ -1.8
VCPP55072 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.81□□□□□ -1.8
VCPP55072 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.81□□□□□ -1.8
VCPP55072 AC104115.2-201ENST00000523026 687 ntBASIC3.81□□□□□ -1.8
VCPP55072 AC010306.1-201ENST00000523223 1117 ntBASIC3.81□□□□□ -1.8
VCPP55072 AC103843.2-201ENST00000530523 682 ntBASIC3.81□□□□□ -1.8
VCPP55072 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.81□□□□□ -1.8
VCPP55072 AL121766.1-201ENST00000547436 487 ntBASIC3.81□□□□□ -1.8
VCPP55072 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.81□□□□□ -1.8
VCPP55072 AC011611.5-201ENST00000552477 578 ntBASIC3.81□□□□□ -1.8
VCPP55072 MIR5186-201ENST00000577504 120 ntBASIC3.81□□□□□ -1.8
VCPP55072 MIR4738-201ENST00000579134 87 ntBASIC3.81□□□□□ -1.8
VCPP55072 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.81□□□□□ -1.8
VCPP55072 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VCPP55072 XIST_intron.1-201ENST00000619444 68 ntBASIC3.81□□□□□ -1.8
VCPP55072 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.81□□□□□ -1.8
VCPP55072 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VCPP55072 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.81□□□□□ -1.8
VCPP55072 AC011978.2-201ENST00000569835 2054 ntBASIC3.8□□□□□ -1.8
VCPP55072 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.8□□□□□ -1.8
VCPP55072 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.8□□□□□ -1.8
VCPP55072 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 RNA5SP374-201ENST00000362939 125 ntBASIC3.8□□□□□ -1.8
VCPP55072 RNU6-1339P-201ENST00000363574 91 ntBASIC3.8□□□□□ -1.8
VCPP55072 RNU6-207P-201ENST00000384137 107 ntBASIC3.8□□□□□ -1.8
VCPP55072 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.8□□□□□ -1.8
VCPP55072 AC069218.2-201ENST00000411665 344 ntBASIC3.8□□□□□ -1.8
VCPP55072 MTND2P16-201ENST00000419987 799 ntBASIC3.8□□□□□ -1.8
VCPP55072 COTL1P1-201ENST00000422309 375 ntBASIC3.8□□□□□ -1.8
VCPP55072 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.8□□□□□ -1.8
VCPP55072 AC005019.1-201ENST00000436455 431 ntBASIC3.8□□□□□ -1.8
VCPP55072 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.8□□□□□ -1.8
VCPP55072 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.8□□□□□ -1.8
VCPP55072 RPL21P18-201ENST00000469899 480 ntBASIC3.8□□□□□ -1.8
VCPP55072 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
VCPP55072 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCPP55072 AC118465.1-201ENST00000513820 1271 ntBASIC3.8□□□□□ -1.8
VCPP55072 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
VCPP55072 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.8□□□□□ -1.8
VCPP55072 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.8□□□□□ -1.8
VCPP55072 AL442163.2-201ENST00000553912 710 ntBASIC3.8□□□□□ -1.8
VCPP55072 TRAV15-201ENST00000556680 249 ntBASIC3.8□□□□□ -1.8
VCPP55072 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.8□□□□□ -1.8
VCPP55072 MIR5047-201ENST00000579212 100 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms