Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RPL7P29-201ENST00000437151 728 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS2P54868 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS2P54868 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS2P54868 MTATP6P22-201ENST00000507369 598 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS2P54868 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGCS2P54868 SCARNA1-201ENST00000517138 166 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 AC087894.1-201ENST00000538359 518 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGCS2P54868 AC027807.1-201ENST00000559921 996 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGCS2P54868 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS2P54868 MIR4789-201ENST00000577469 82 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AP001180.3-201ENST00000582221 145 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 BNIP3P40-201ENST00000596017 556 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGCS2P54868 AC091057.3-201ENST00000602684 733 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AC096586.1-201ENST00000610267 561 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGCS2P54868 AC090772.4-201ENST00000623599 362 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
HMGCS2P54868 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 ZNF849P-201ENST00000594711 1566 ntBASIC3.72□□□□□ -1.81
HMGCS2P54868 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCS2P54868 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.71□□□□□ -1.81
HMGCS2P54868 AC058791.1-201ENST00000608412 3198 ntBASIC3.71□□□□□ -1.81
HMGCS2P54868 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.71□□□□□ -1.81
HMGCS2P54868 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AC096533.1-201ENST00000411645 353 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 UBE2V1P9-201ENST00000414760 368 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGCS2P54868 RAC1P3-201ENST00000416129 580 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AC241520.1-201ENST00000422654 1099 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 FTH1P6-201ENST00000430768 320 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AC023347.2-201ENST00000433994 462 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AC107083.1-201ENST00000439643 279 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGCS2P54868 RPL23AP71-201ENST00000470966 469 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AP000926.1-201ENST00000479573 241 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGCS2P54868 RNU6-415P-201ENST00000516252 97 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC009812.2-201ENST00000517657 457 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGCS2P54868 NARSP2-201ENST00000518524 679 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AC083923.1-201ENST00000523708 376 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 POLR2KP1-201ENST00000553226 168 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AL360157.1-201ENST00000565962 87 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC099785.1-201ENST00000605697 437 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 AC026790.2-201ENST00000606282 430 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGCS2P54868 AP003485.1-201ENST00000625093 753 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 AP001486.2-201ENST00000561652 5113 ntBASIC3.71□□□□□ -1.82
HMGCS2P54868 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGCS2P54868 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGCS2P54868 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGCS2P54868 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGCS2P54868 ENSAP3-201ENST00000312710 333 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 ANKRD36P1-201ENST00000344424 659 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 RNA5SP502-201ENST00000362694 119 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 SNORD65C-201ENST00000390962 71 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 RNU6-932P-201ENST00000391108 106 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 RN7SKP56-201ENST00000410513 331 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC004022.2-201ENST00000413824 193 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AL513174.1-201ENST00000423182 629 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HMGCS2P54868 USP9YP36-201ENST00000424581 829 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGCS2P54868 USP9YP31-201ENST00000431405 881 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC105402.2-201ENST00000438503 358 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGCS2P54868 ARF4P4-201ENST00000439608 520 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 HSFY3P-201ENST00000444242 1191 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms