Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 RNA5SP284-201ENST00000384547 118 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 RNU2-21P-201ENST00000410368 188 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 Y_RNA.594-201ENST00000410373 140 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHA4P54764 RPS15AP40-201ENST00000419621 391 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 CYCSP12-201ENST00000437729 300 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.85□□□□□ -1.47
EPHA4P54764 RPS27AP3-201ENST00000453803 454 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 AC234775.1-201ENST00000454247 670 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHA4P54764 RNU7-167P-201ENST00000459160 62 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 RPL7P51-201ENST00000490532 749 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
EPHA4P54764 AC026782.1-201ENST00000512952 449 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 RNU6-699P-201ENST00000517081 110 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 IGKV3D-34-201ENST00000522638 302 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 AP000827.1-201ENST00000527814 258 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 AC079600.1-201ENST00000550326 297 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHA4P54764 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.85□□□□□ -1.47
EPHA4P54764 AC005357.1-201ENST00000588399 301 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 AC008521.2-201ENST00000591021 259 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 COX6CP7-201ENST00000597056 208 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 AL589994.2-201ENST00000621124 579 ntBASIC5.85□□□□□ -1.47
EPHA4P54764 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
EPHA4P54764 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
EPHA4P54764 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
EPHA4P54764 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
EPHA4P54764 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
EPHA4P54764 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHA4P54764 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHA4P54764 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
EPHA4P54764 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHA4P54764 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHA4P54764 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 Y_RNA.153-201ENST00000363615 91 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 RNU6-379P-201ENST00000363813 104 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 Y_RNA.493-201ENST00000384422 102 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC016739.1-201ENST00000405359 345 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 MIR1203-201ENST00000408812 85 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 RNU4-65P-201ENST00000410473 140 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 RNA5SP111-201ENST00000411386 101 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 RPL35AP3-201ENST00000414680 288 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 UBE2FP1-201ENST00000416536 447 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.84□□□□□ -1.47
EPHA4P54764 USMG5P1-201ENST00000425964 177 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHA4P54764 AC093106.2-201ENST00000428212 385 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL360081.1-201ENST00000428299 555 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHA4P54764 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHA4P54764 REG1CP-206ENST00000447469 496 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHA4P54764 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHA4P54764 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 HMGB3P30-201ENST00000457863 606 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 NXT1P1-201ENST00000458481 316 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHA4P54764 AC104472.2-201ENST00000469035 601 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC007998.1-201ENST00000474156 672 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHA4P54764 AC104564.1-201ENST00000493028 407 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 RBBP4P6-201ENST00000508098 202 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC104136.1-201ENST00000512969 394 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHA4P54764 AC016065.2-201ENST00000514530 444 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 Y_RNA.670-201ENST00000516255 105 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 RNU6-1069P-201ENST00000516612 133 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 RNU6-1332P-201ENST00000516666 104 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC105031.1-201ENST00000518550 476 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHA4P54764 SETP7-201ENST00000552169 453 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL121576.1-201ENST00000556055 276 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC091078.2-201ENST00000557145 559 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 HMGN2P47-201ENST00000559378 272 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHA4P54764 AC018552.1-201ENST00000562099 811 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC092121.1-201ENST00000569452 202 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 MIR4776-2-201ENST00000580204 80 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AC020916.2-201ENST00000591242 360 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL355812.1-201ENST00000603215 216 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 AL118522.2-201ENST00000616045 615 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHA4P54764 CYP4F35P-202ENST00000636121 390 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL732372.2-225ENST00000642124 456 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHA4P54764 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHA4P54764 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHA4P54764 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHA4P54764 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.84□□□□□ -1.47
EPHA4P54764 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms