Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COPB1P53618 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPB1P53618 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COPB1P53618 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
COPB1P53618 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COPB1P53618 AC007390.2-201ENST00000606229 3803 ntBASIC4.55□□□□□ -1.68
COPB1P53618 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPB1P53618 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPB1P53618 OR5BR1P-201ENST00000524992 1330 ntBASIC4.54□□□□□ -1.68
COPB1P53618 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 Y_RNA.3-201ENST00000362331 103 ntBASIC4.54□□□□□ -1.68
COPB1P53618 RNU4-91P-201ENST00000364778 135 ntBASIC4.54□□□□□ -1.68
COPB1P53618 MIR708-201ENST00000390708 88 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AC007066.1-201ENST00000392902 381 ntBASIC4.54□□□□□ -1.68
COPB1P53618 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.54□□□□□ -1.68
COPB1P53618 AC092647.1-201ENST00000420654 287 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.54□□□□□ -1.68
COPB1P53618 AC011742.1-201ENST00000431448 434 ntBASIC4.54□□□□□ -1.68
COPB1P53618 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.54□□□□□ -1.68
COPB1P53618 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.54□□□□□ -1.68
COPB1P53618 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.54□□□□□ -1.68
COPB1P53618 AL357520.1-201ENST00000441557 453 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.54□□□□□ -1.68
COPB1P53618 AL592447.1-201ENST00000447592 540 ntBASIC4.54□□□□□ -1.68
COPB1P53618 RPL26P28-201ENST00000451325 435 ntBASIC4.54□□□□□ -1.68
COPB1P53618 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.54□□□□□ -1.68
COPB1P53618 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPB1P53618 RNA5SP269-201ENST00000459032 137 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AC007537.2-201ENST00000472093 511 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AC011825.1-201ENST00000484967 388 ntBASIC4.54□□□□□ -1.68
COPB1P53618 KLRA1P-201ENST00000503499 986 ntBASIC4.54□□□□□ -1.68
COPB1P53618 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPB1P53618 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPB1P53618 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.54□□□□□ -1.68
COPB1P53618 AC090071.1-201ENST00000507713 644 ntBASIC4.54□□□□□ -1.68
COPB1P53618 RNU6-202P-201ENST00000515998 96 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.54□□□□□ -1.68
COPB1P53618 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.54□□□□□ -1.68
COPB1P53618 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.54□□□□□ -1.68
COPB1P53618 AP000790.1-201ENST00000528891 737 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COPB1P53618 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.54□□□□□ -1.68
COPB1P53618 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.54□□□□□ -1.68
COPB1P53618 AC136618.2-201ENST00000575091 400 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AC017100.2-201ENST00000584628 355 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.54□□□□□ -1.68
COPB1P53618 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 AC015908.5-201ENST00000623289 343 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.54□□□□□ -1.68
COPB1P53618 AL773545.4-201ENST00000637262 310 ntBASIC4.54□□□□□ -1.68
COPB1P53618 AL513478.4-201ENST00000641636 310 ntBASIC4.54□□□□□ -1.68
COPB1P53618 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
COPB1P53618 AC009313.2-201ENST00000417893 1941 ntBASIC4.54□□□□□ -1.68
COPB1P53618 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COPB1P53618 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.54□□□□□ -1.68
COPB1P53618 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.53□□□□□ -1.68
COPB1P53618 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPB1P53618 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COPB1P53618 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COPB1P53618 ERCC6-202ENST00000374127 1782 ntBASIC4.53□□□□□ -1.68
COPB1P53618 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.53□□□□□ -1.68
COPB1P53618 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPB1P53618 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
COPB1P53618 ASNSP1-201ENST00000518311 1939 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC025125.1-201ENST00000624743 1922 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC016716.1-201ENST00000265882 708 ntBASIC4.53□□□□□ -1.68
COPB1P53618 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COPB1P53618 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.53□□□□□ -1.68
COPB1P53618 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
COPB1P53618 Y_RNA.517-201ENST00000384551 106 ntBASIC4.53□□□□□ -1.68
COPB1P53618 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.53□□□□□ -1.68
COPB1P53618 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.53□□□□□ -1.68
COPB1P53618 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.53□□□□□ -1.68
COPB1P53618 C8orf59P1-201ENST00000429930 303 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC010881.1-201ENST00000433830 235 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.53□□□□□ -1.68
COPB1P53618 UBE2FP3-201ENST00000436366 524 ntBASIC4.53□□□□□ -1.68
COPB1P53618 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.53□□□□□ -1.68
COPB1P53618 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.53□□□□□ -1.68
COPB1P53618 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.53□□□□□ -1.68
COPB1P53618 COX6CP12-201ENST00000446748 202 ntBASIC4.53□□□□□ -1.68
COPB1P53618 TRGVB-201ENST00000453257 471 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.53□□□□□ -1.68
COPB1P53618 AF213884.1-201ENST00000488102 463 ntBASIC4.53□□□□□ -1.68
COPB1P53618 RPS4XP15-201ENST00000489210 795 ntBASIC4.53□□□□□ -1.68
COPB1P53618 RPL35P6-201ENST00000490024 372 ntBASIC4.53□□□□□ -1.68
COPB1P53618 RN7SL810P-201ENST00000493031 276 ntBASIC4.53□□□□□ -1.68
COPB1P53618 MTCYBP17-201ENST00000503579 789 ntBASIC4.53□□□□□ -1.68
COPB1P53618 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
COPB1P53618 RNU6-583P-201ENST00000516012 92 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.53□□□□□ -1.68
COPB1P53618 AL139174.1-201ENST00000531489 886 ntBASIC4.53□□□□□ -1.68
COPB1P53618 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.53□□□□□ -1.68
COPB1P53618 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms