Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 DEFB130C-202ENST00000530001 230 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 ZNF705CP-201ENST00000530515 889 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC107954.1-201ENST00000565906 727 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 MIR5708-201ENST00000579723 85 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 AL606834.3-201ENST00000602615 496 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC025588.3-201ENST00000604182 274 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 MIR8058-201ENST00000615737 89 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC233309.1-201ENST00000619522 751 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 ZNF663P-202ENST00000641770 1131 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AL732372.2-225ENST00000642124 456 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFRSF4P43489 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFRSF4P43489 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFRSF4P43489 ZNF37BP-203ENST00000452306 1352 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFRSF4P43489 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 RNU4-35P-201ENST00000362588 141 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 RNU6-251P-201ENST00000363235 104 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 RNU6-1066P-201ENST00000363573 105 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 RHOT1P2-201ENST00000366423 333 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 SNORD17-201ENST00000390930 237 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 MTCO1P56-201ENST00000401674 224 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AL121972.1-201ENST00000402023 252 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AL079342.2-201ENST00000403367 482 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 RPL23AP48-201ENST00000406913 488 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 RN7SKP111-201ENST00000410349 271 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AL133384.1-201ENST00000412744 351 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AL136133.1-201ENST00000413694 376 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 OR1AA1P-201ENST00000419597 916 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 C1DP1-201ENST00000426049 402 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 DPRXP1-201ENST00000426312 460 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 Z93242.1-201ENST00000427102 353 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC241584.1-201ENST00000438469 1241 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 RPL26P28-201ENST00000451325 435 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC133473.1-201ENST00000455173 299 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 RPS4XP10-201ENST00000465034 731 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC025518.1-201ENST00000479856 347 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 VPS26AP1-201ENST00000483197 979 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC079203.1-201ENST00000487972 404 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 PRELID3BP6-201ENST00000503839 571 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 BOLA3P3-201ENST00000505182 232 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AP001317.1-201ENST00000531194 960 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC007424.1-203ENST00000554613 687 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 MTCYBP27-201ENST00000555160 670 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC006270.2-201ENST00000578523 652 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC112220.2-201ENST00000605513 533 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC026790.2-201ENST00000606282 430 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AL354976.1-201ENST00000613843 387 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC084824.4-201ENST00000620106 731 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AP001002.2-201ENST00000625137 386 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC026634.1-201ENST00000634369 198 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 AC000367.1-201ENST00000452711 1766 ntBASIC3.6□□□□□ -1.83
TNFRSF4P43489 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFRSF4P43489 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFRSF4P43489 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms