Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC023813.4-201ENST00000607580 580 ntBASIC2.73□□□□□ -1.97
HTTP42858 AC103710.2-201ENST00000609912 942 ntBASIC2.73□□□□□ -1.97
HTTP42858 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HTTP42858 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
HTTP42858 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
HTTP42858 Y_RNA.116-201ENST00000363292 103 ntBASIC2.72□□□□□ -1.97
HTTP42858 MIR518E-201ENST00000385252 88 ntBASIC2.72□□□□□ -1.97
HTTP42858 AC091917.2-201ENST00000505002 744 ntBASIC2.72□□□□□ -1.97
HTTP42858 RNU6-1053P-201ENST00000515930 101 ntBASIC2.72□□□□□ -1.97
HTTP42858 OR10AB1P-202ENST00000641219 1686 ntBASIC2.72□□□□□ -1.97
HTTP42858 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HTTP42858 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HTTP42858 AL591416.1-201ENST00000404015 867 ntBASIC2.72□□□□□ -1.97
HTTP42858 RNU2-2P-201ENST00000410396 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.72□□□□□ -1.97
HTTP42858 U2.15-201ENST00000611544 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.16-201ENST00000613119 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.12-201ENST00000613778 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.20-201ENST00000613956 192 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.9-201ENST00000615427 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.11-201ENST00000616345 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.2-201ENST00000616535 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.3-201ENST00000617785 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.19-201ENST00000618602 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 RNU2-1-201ENST00000618664 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.6-201ENST00000619225 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.5-201ENST00000619465 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 U2.10-201ENST00000620268 191 ntBASIC2.72□□□□□ -1.97
HTTP42858 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.72□□□□□ -1.97
HTTP42858 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HTTP42858 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HTTP42858 MTND4P26-201ENST00000415971 1359 ntBASIC2.72□□□□□ -1.97
HTTP42858 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HTTP42858 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
HTTP42858 AL512646.1-201ENST00000269395 1077 ntBASIC2.71□□□□□ -1.98
HTTP42858 RNU1-75P-201ENST00000347264 129 ntBASIC2.71□□□□□ -1.98
HTTP42858 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.71□□□□□ -1.98
HTTP42858 RPS26P40-201ENST00000435209 294 ntBASIC2.71□□□□□ -1.98
HTTP42858 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.71□□□□□ -1.98
HTTP42858 AL355836.1-201ENST00000555951 870 ntBASIC2.71□□□□□ -1.98
HTTP42858 RPL21P75-201ENST00000396599 483 ntBASIC2.71□□□□□ -1.98
HTTP42858 RPL21P1-201ENST00000399532 476 ntBASIC2.71□□□□□ -1.98
HTTP42858 RPL21P28-201ENST00000401418 483 ntBASIC2.71□□□□□ -1.98
HTTP42858 AL592114.1-201ENST00000403842 483 ntBASIC2.71□□□□□ -1.98
HTTP42858 RNA5SP107-201ENST00000411358 122 ntBASIC2.71□□□□□ -1.98
HTTP42858 AC073587.1-201ENST00000447093 876 ntBASIC2.71□□□□□ -1.98
HTTP42858 RPL21P16-201ENST00000495531 483 ntBASIC2.71□□□□□ -1.98
HTTP42858 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
HTTP42858 RNA5SP281-201ENST00000516504 135 ntBASIC2.71□□□□□ -1.98
HTTP42858 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HTTP42858 snoU13.31-201ENST00000607291 104 ntBASIC2.71□□□□□ -1.98
HTTP42858 AP001521.1-201ENST00000609150 300 ntBASIC2.71□□□□□ -1.98
HTTP42858 CRYM-AS1-204ENST00000637983 556 ntBASIC2.71□□□□□ -1.98
HTTP42858 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HTTP42858 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HTTP42858 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HTTP42858 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
HTTP42858 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HTTP42858 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
HTTP42858 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.71□□□□□ -1.98
HTTP42858 AL592437.1-201ENST00000443781 492 ntBASIC2.71□□□□□ -1.98
HTTP42858 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.71□□□□□ -1.98
HTTP42858 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.71□□□□□ -1.98
HTTP42858 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.71□□□□□ -1.98
HTTP42858 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.71□□□□□ -1.98
HTTP42858 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HTTP42858 RN7SKP140-201ENST00000411196 284 ntBASIC2.7□□□□□ -1.98
HTTP42858 AC233280.2-201ENST00000603917 1070 ntBASIC2.7□□□□□ -1.98
HTTP42858 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.7□□□□□ -1.98
HTTP42858 Z73965.1-201ENST00000623412 2297 ntBASIC2.7□□□□□ -1.98
HTTP42858 Z82209.1-201ENST00000422141 2135 ntBASIC2.7□□□□□ -1.98
HTTP42858 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
HTTP42858 AC093831.2-201ENST00000624393 3427 ntBASIC2.7□□□□□ -1.98
HTTP42858 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
HTTP42858 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HTTP42858 RNA5SP456-201ENST00000364002 114 ntBASIC2.7□□□□□ -1.98
HTTP42858 RN7SKP32-201ENST00000410167 303 ntBASIC2.7□□□□□ -1.98
HTTP42858 AL353729.1-201ENST00000425044 720 ntBASIC2.7□□□□□ -1.98
HTTP42858 AP000936.3-201ENST00000438127 255 ntBASIC2.7□□□□□ -1.98
HTTP42858 AP004217.1-201ENST00000480579 346 ntBASIC2.7□□□□□ -1.98
HTTP42858 AC021146.1-201ENST00000511202 716 ntBASIC2.7□□□□□ -1.98
HTTP42858 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.7□□□□□ -1.98
HTTP42858 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.7□□□□□ -1.98
HTTP42858 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.7□□□□□ -1.98
HTTP42858 MIR3605-201ENST00000583214 100 ntBASIC2.7□□□□□ -1.98
HTTP42858 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.7□□□□□ -1.98
HTTP42858 AL022099.1-201ENST00000604551 712 ntBASIC2.7□□□□□ -1.98
HTTP42858 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.69□□□□□ -1.98
HTTP42858 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HTTP42858 AC004987.3-201ENST00000413879 771 ntBASIC2.69□□□□□ -1.98
HTTP42858 AL451074.5-201ENST00000415894 435 ntBASIC2.69□□□□□ -1.98
HTTP42858 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.69□□□□□ -1.98
HTTP42858 MTCO1P42-201ENST00000457379 726 ntBASIC2.69□□□□□ -1.98
HTTP42858 AC021733.2-201ENST00000518830 497 ntBASIC2.69□□□□□ -1.98
HTTP42858 OR8L1P-201ENST00000534005 955 ntBASIC2.69□□□□□ -1.98
HTTP42858 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.69□□□□□ -1.98
HTTP42858 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.69□□□□□ -1.98
HTTP42858 MIR6873-201ENST00000622788 63 ntBASIC2.69□□□□□ -1.98
HTTP42858 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
HTTP42858 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms