Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RMST_3.1-201ENST00000611651 109 ntBASIC5.12□□□□□ -1.59
LTBRP36941 AC006504.8-201ENST00000621046 635 ntBASIC5.12□□□□□ -1.59
LTBRP36941 AL136221.1-201ENST00000621449 509 ntBASIC5.12□□□□□ -1.59
LTBRP36941 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBRP36941 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LTBRP36941 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LTBRP36941 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LTBRP36941 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.12□□□□□ -1.59
LTBRP36941 OR56B2P-202ENST00000641377 2453 ntBASIC5.12□□□□□ -1.59
LTBRP36941 AC009951.1-201ENST00000623674 2614 ntBASIC5.11□□□□□ -1.59
LTBRP36941 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBRP36941 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBRP36941 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 CKAP2P1-201ENST00000555477 2049 ntBASIC5.11□□□□□ -1.59
LTBRP36941 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBRP36941 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBRP36941 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LTBRP36941 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBRP36941 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBRP36941 RNU6-451P-201ENST00000362921 107 ntBASIC5.11□□□□□ -1.59
LTBRP36941 RNU6-1120P-201ENST00000362988 108 ntBASIC5.11□□□□□ -1.59
LTBRP36941 RNA5SP28-201ENST00000363841 119 ntBASIC5.11□□□□□ -1.59
LTBRP36941 RNA5SP509-201ENST00000364577 119 ntBASIC5.11□□□□□ -1.59
LTBRP36941 RNU6-169P-201ENST00000365336 107 ntBASIC5.11□□□□□ -1.59
LTBRP36941 Y_RNA.356-201ENST00000365475 113 ntBASIC5.11□□□□□ -1.59
LTBRP36941 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBRP36941 RN7SKP235-201ENST00000410662 305 ntBASIC5.11□□□□□ -1.59
LTBRP36941 OR9R1P-201ENST00000412200 877 ntBASIC5.11□□□□□ -1.59
LTBRP36941 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.11□□□□□ -1.59
LTBRP36941 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBRP36941 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBRP36941 AL606489.2-201ENST00000433886 234 ntBASIC5.11□□□□□ -1.59
LTBRP36941 BNIP3P2-201ENST00000441221 577 ntBASIC5.11□□□□□ -1.59
LTBRP36941 TDGF1P1-201ENST00000445734 527 ntBASIC5.11□□□□□ -1.59
LTBRP36941 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 BX842559.2-201ENST00000451418 605 ntBASIC5.11□□□□□ -1.59
LTBRP36941 RPS20P20-201ENST00000460498 340 ntBASIC5.11□□□□□ -1.59
LTBRP36941 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBRP36941 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBRP36941 RNU6-1220P-201ENST00000517126 108 ntBASIC5.11□□□□□ -1.59
LTBRP36941 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBRP36941 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.11□□□□□ -1.59
LTBRP36941 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBRP36941 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBRP36941 CYCSP29-201ENST00000533731 318 ntBASIC5.11□□□□□ -1.59
LTBRP36941 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBRP36941 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBRP36941 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBRP36941 AC092470.1-201ENST00000546187 132 ntBASIC5.11□□□□□ -1.59
LTBRP36941 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.11□□□□□ -1.59
LTBRP36941 AC133555.2-201ENST00000550213 292 ntBASIC5.11□□□□□ -1.59
LTBRP36941 AC022726.1-201ENST00000587475 207 ntBASIC5.11□□□□□ -1.59
LTBRP36941 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.11□□□□□ -1.59
LTBRP36941 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.11□□□□□ -1.59
LTBRP36941 AL596245.1-201ENST00000618994 362 ntBASIC5.11□□□□□ -1.59
LTBRP36941 AC008785.1-201ENST00000624475 456 ntBASIC5.11□□□□□ -1.59
LTBRP36941 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LTBRP36941 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.11□□□□□ -1.59
LTBRP36941 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
LTBRP36941 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBRP36941 AC125336.1-201ENST00000508893 2827 ntBASIC5.1□□□□□ -1.59
LTBRP36941 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBRP36941 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LTBRP36941 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBRP36941 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LTBRP36941 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LTBRP36941 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBRP36941 RNA5SP258-201ENST00000362750 119 ntBASIC5.1□□□□□ -1.59
LTBRP36941 RNU1-130P-201ENST00000363930 160 ntBASIC5.1□□□□□ -1.59
LTBRP36941 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LTBRP36941 Y_RNA.535-201ENST00000384612 99 ntBASIC5.1□□□□□ -1.59
LTBRP36941 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBRP36941 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBRP36941 RNU2-9P-201ENST00000410194 145 ntBASIC5.1□□□□□ -1.59
LTBRP36941 RNA5SP118-201ENST00000410385 109 ntBASIC5.1□□□□□ -1.59
LTBRP36941 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBRP36941 TBCAP2-201ENST00000416175 326 ntBASIC5.1□□□□□ -1.59
LTBRP36941 AC108734.1-201ENST00000439549 399 ntBASIC5.1□□□□□ -1.59
LTBRP36941 AL359073.1-201ENST00000448036 403 ntBASIC5.1□□□□□ -1.59
LTBRP36941 MTCO2P29-201ENST00000465212 189 ntBASIC5.1□□□□□ -1.59
LTBRP36941 RPL39P36-201ENST00000490784 156 ntBASIC5.1□□□□□ -1.59
LTBRP36941 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBRP36941 RNU6-835P-201ENST00000516974 104 ntBASIC5.1□□□□□ -1.59
LTBRP36941 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBRP36941 AP003497.1-201ENST00000528472 562 ntBASIC5.1□□□□□ -1.59
LTBRP36941 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBRP36941 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBRP36941 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.1□□□□□ -1.59
LTBRP36941 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBRP36941 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
LTBRP36941 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBRP36941 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.1□□□□□ -1.59
LTBRP36941 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.1□□□□□ -1.59
LTBRP36941 AC084783.1-201ENST00000565846 910 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms