Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC021205.2-201ENST00000480069 347 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AC092902.1-201ENST00000486999 259 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 AC112198.1-201ENST00000505369 1220 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.3□□□□□ -1.88
SHMT2P34897 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.3□□□□□ -1.88
SHMT2P34897 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.3□□□□□ -1.88
SHMT2P34897 RNU5A-7P-201ENST00000515979 116 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 RN7SKP289-201ENST00000517244 295 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AP003355.1-201ENST00000518956 587 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 HIGD1AP6-201ENST00000521833 279 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.3□□□□□ -1.88
SHMT2P34897 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.3□□□□□ -1.88
SHMT2P34897 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 MTCO1P40-201ENST00000574371 625 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 MTATP6P2-201ENST00000603319 678 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AC024220.1-201ENST00000603675 484 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AC069200.1-201ENST00000609511 323 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AC092574.1-201ENST00000609771 420 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.3□□□□□ -1.88
SHMT2P34897 MIR8058-201ENST00000615737 89 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 AC110801.1-201ENST00000623590 212 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.3□□□□□ -1.88
SHMT2P34897 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHMT2P34897 AL356274.2-201ENST00000624379 3752 ntBASIC3.3□□□□□ -1.88
SHMT2P34897 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.3□□□□□ -1.88
SHMT2P34897 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHMT2P34897 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
SHMT2P34897 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHMT2P34897 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.29□□□□□ -1.88
SHMT2P34897 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SHMT2P34897 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHMT2P34897 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHMT2P34897 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHMT2P34897 MIR34B-201ENST00000385076 84 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 SKINT1L-201ENST00000401057 817 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 HSPE1P26-201ENST00000405341 275 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.29□□□□□ -1.88
SHMT2P34897 AIMP1P1-201ENST00000418670 937 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.29□□□□□ -1.88
SHMT2P34897 AC097713.2-201ENST00000430199 356 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 RPL36P19-201ENST00000430744 301 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 UBE2V1P1-201ENST00000430836 445 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.29□□□□□ -1.88
SHMT2P34897 Z77249.1-201ENST00000444622 1175 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC008264.1-201ENST00000447612 367 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.29□□□□□ -1.88
SHMT2P34897 RPL12P26-201ENST00000452430 487 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC097262.1-201ENST00000452559 548 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 RNU7-140P-201ENST00000459546 60 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 RPL7P49-201ENST00000471402 708 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 RPL32P34-201ENST00000486380 400 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC093663.1-201ENST00000497190 394 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.29□□□□□ -1.88
SHMT2P34897 TMEM248P1-201ENST00000510579 951 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 APOOP4-201ENST00000513530 597 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 HMGB1P1-201ENST00000522557 636 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.29□□□□□ -1.88
SHMT2P34897 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.29□□□□□ -1.88
SHMT2P34897 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.29□□□□□ -1.88
SHMT2P34897 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.29□□□□□ -1.88
SHMT2P34897 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.29□□□□□ -1.88
SHMT2P34897 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
SHMT2P34897 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.29□□□□□ -1.88
SHMT2P34897 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.29□□□□□ -1.88
SHMT2P34897 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.29□□□□□ -1.88
SHMT2P34897 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.29□□□□□ -1.88
SHMT2P34897 BNIP3P19-201ENST00000605397 577 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AP004247.3-201ENST00000608682 624 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.29□□□□□ -1.88
SHMT2P34897 AL590396.4-201ENST00000636779 956 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHMT2P34897 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHMT2P34897 AL021368.2-201ENST00000606125 5352 ntBASIC3.29□□□□□ -1.88
SHMT2P34897 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
SHMT2P34897 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHMT2P34897 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.28□□□□□ -1.88
SHMT2P34897 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHMT2P34897 RNA5SP107-201ENST00000411358 122 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 Z99755.1-201ENST00000414048 380 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 RPF2P1-201ENST00000424137 906 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 BX890604.2-201ENST00000427883 474 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.28□□□□□ -1.88
SHMT2P34897 AC125238.1-201ENST00000448842 249 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms