Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXA9P31269 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA9P31269 AL121603.1-201ENST00000553815 142 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 MTND4LP24-201ENST00000572277 291 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA9P31269 AP000919.1-202ENST00000581139 1264 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 CBX3P2-202ENST00000583365 535 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 AL392112.1-201ENST00000605115 829 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXA9P31269 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA9P31269 AC093908.1-201ENST00000623125 8092 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXA9P31269 MIR622-201ENST00000638396 96 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXA9P31269 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXA9P31269 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HOXA9P31269 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXA9P31269 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
HOXA9P31269 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXA9P31269 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA9P31269 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA9P31269 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HOXA9P31269 RNU6-252P-201ENST00000363232 107 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 SNORA51.2-201ENST00000364595 132 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AP002088.1-201ENST00000382740 395 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 SNORA44-201ENST00000384584 132 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 SNORA40.4-201ENST00000390971 128 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 MIR1289-1-201ENST00000408836 144 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA9P31269 RPL23AP69-201ENST00000431134 458 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC140076.1-201ENST00000449897 361 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXA9P31269 PTGES3P5-201ENST00000455109 434 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC080014.1-201ENST00000496877 1201 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC025459.1-201ENST00000504072 156 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA9P31269 MTND3P24-201ENST00000506306 329 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA9P31269 AC090071.1-201ENST00000507713 644 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXA9P31269 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA9P31269 AC022146.1-201ENST00000595307 847 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 ZNF92P2-201ENST00000600543 1059 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 SUMO2P14-201ENST00000604488 293 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 RPL21P136-201ENST00000605378 396 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC113194.1-201ENST00000606037 500 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AP004607.9-201ENST00000618202 316 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 AC005858.4-201ENST00000623191 700 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 SNORA50A-202ENST00000629536 136 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 MIR4496-201ENST00000635896 61 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA9P31269 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXA9P31269 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA9P31269 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXA9P31269 AL512283.1-201ENST00000606756 1384 ntBASIC3.38□□□□□ -1.87
HOXA9P31269 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA9P31269 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA9P31269 ZNF826P-207ENST00000622273 1910 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HOXA9P31269 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA9P31269 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA9P31269 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HOXA9P31269 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 SNORA80A-201ENST00000363922 136 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA9P31269 TAF9BP2-201ENST00000400856 499 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 DNAJC19P6-201ENST00000401853 280 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA9P31269 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AC241520.1-201ENST00000422654 1099 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 RPL23AP82-202ENST00000427528 469 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AL160175.1-201ENST00000428124 247 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 CKS1BP5-201ENST00000434172 273 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AC107083.1-201ENST00000439643 279 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA9P31269 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXA9P31269 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXA9P31269 AC092754.2-201ENST00000463506 460 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 CENPBD1P1-201ENST00000464061 469 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 RPL21P104-201ENST00000464143 478 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXA9P31269 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXA9P31269 HMGB3P15-201ENST00000507326 574 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AC010468.3-201ENST00000508225 458 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA9P31269 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA9P31269 AP003049.1-201ENST00000529418 457 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA9P31269 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA9P31269 AC025260.1-201ENST00000548858 430 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 TGIF1P1-201ENST00000558095 802 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXA9P31269 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXA9P31269 AC006023.2-201ENST00000609916 167 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 AL445493.3-201ENST00000619568 477 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 FRG1DP-201ENST00000635586 771 ntBASIC3.37□□□□□ -1.87
HOXA9P31269 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms