Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CNGA1P29973 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNGA1P29973 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 Z73965.1-201ENST00000623412 2297 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 RNU6-744P-201ENST00000365557 107 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 RNU6-1316P-201ENST00000384242 108 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 Y_RNA.559-201ENST00000384686 107 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 RPS26P8-201ENST00000393490 348 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 MIR1250-201ENST00000408098 113 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 EIF4HP2-201ENST00000424380 563 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 EZH2P1-201ENST00000431167 291 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 SDCBPP1-201ENST00000440192 890 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 USP9YP29-201ENST00000445112 563 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 GDI2P2-201ENST00000445131 608 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AL590399.6-201ENST00000446396 307 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 RPL36AP41-201ENST00000493820 306 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 TXNP6-201ENST00000510190 310 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AC079140.3-201ENST00000511111 550 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AC093677.1-201ENST00000514414 678 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC022882.1-201ENST00000532142 501 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC012213.3-201ENST00000577199 777 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.25□□□□□ -1.57
CNGA1P29973 AC068790.2-201ENST00000602601 557 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AC010678.1-201ENST00000614118 713 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AC015914.2-201ENST00000618167 288 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AL596245.1-201ENST00000618994 362 ntBASIC5.25□□□□□ -1.57
CNGA1P29973 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.25□□□□□ -1.57
CNGA1P29973 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNGA1P29973 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.24□□□□□ -1.57
CNGA1P29973 OR51H2P-202ENST00000641424 3046 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.24□□□□□ -1.57
CNGA1P29973 AC087190.4-201ENST00000574616 8334 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CNGA1P29973 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CNGA1P29973 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.24□□□□□ -1.57
CNGA1P29973 AC008549.2-201ENST00000333482 706 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 RNU1-94P-201ENST00000362627 173 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 MT-TC-201ENST00000387405 66 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 MTCO1P17-201ENST00000411522 491 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 MTCYBP24-201ENST00000420387 1106 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.24□□□□□ -1.57
CNGA1P29973 RPS12P10-201ENST00000427031 377 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 RPL23AP33-201ENST00000442301 452 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.24□□□□□ -1.57
CNGA1P29973 AL359073.1-201ENST00000448036 403 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AC146507.1-201ENST00000468335 354 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AC090686.1-201ENST00000481577 749 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AC105137.1-201ENST00000484355 562 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AC091167.1-201ENST00000492017 396 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.24□□□□□ -1.57
CNGA1P29973 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.24□□□□□ -1.57
CNGA1P29973 FABP5P5-201ENST00000515537 406 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.24□□□□□ -1.57
CNGA1P29973 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.24□□□□□ -1.57
CNGA1P29973 AC024224.1-201ENST00000538284 609 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.24□□□□□ -1.57
CNGA1P29973 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.24□□□□□ -1.57
CNGA1P29973 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.24□□□□□ -1.57
CNGA1P29973 AC105129.1-201ENST00000560250 297 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.24□□□□□ -1.57
CNGA1P29973 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.24□□□□□ -1.57
CNGA1P29973 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms