Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN4P29074 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN4P29074 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN4P29074 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN4P29074 AL513174.1-201ENST00000423182 629 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 HSFY7P-201ENST00000432672 318 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC011242.1-201ENST00000433596 1158 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 HSFY8P-201ENST00000437934 318 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 RAB11AP1-201ENST00000442978 646 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 PDSS1P2-201ENST00000449397 678 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN4P29074 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN4P29074 HSFY5P-201ENST00000453726 309 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AL133162.1-201ENST00000463228 453 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 GAPDHP39-201ENST00000481866 979 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 UBE2CP3-201ENST00000502715 450 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC093801.2-201ENST00000503966 1050 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC006499.5-201ENST00000505037 514 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.64□□□□□ -1.83
PTPN4P29074 RNA5SP135-201ENST00000517019 125 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN4P29074 AP004371.1-201ENST00000525240 214 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN4P29074 AP003385.6-201ENST00000531603 374 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.64□□□□□ -1.83
PTPN4P29074 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN4P29074 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PTPN4P29074 AC023825.1-201ENST00000566704 1030 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 MIR4666A-201ENST00000580160 79 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN4P29074 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN4P29074 RPAP2P1-201ENST00000603626 1168 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 DPRXP5-201ENST00000604662 539 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC069200.1-201ENST00000609511 323 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AC019176.2-201ENST00000611579 315 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 AL450489.1-201ENST00000612071 468 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN4P29074 AC009093.8-201ENST00000641769 292 ntBASIC3.64□□□□□ -1.83
PTPN4P29074 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN4P29074 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN4P29074 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN4P29074 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN4P29074 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN4P29074 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN4P29074 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN4P29074 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
PTPN4P29074 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 AC024560.2-201ENST00000507981 1497 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 MIR30E-201ENST00000362104 92 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 MTCO3P31-201ENST00000405526 789 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 RPS7P13-201ENST00000413955 498 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN4P29074 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN4P29074 SFR1P2-201ENST00000421841 730 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN4P29074 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AC091286.1-201ENST00000431233 461 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 NDUFB1P1-201ENST00000435191 180 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 AC006480.1-201ENST00000449887 378 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN4P29074 RN7SL442P-201ENST00000473804 320 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN4P29074 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 AC020893.1-201ENST00000502452 580 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 RNA5SP164-201ENST00000516533 110 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 SCARNA14-201ENST00000516903 136 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 IGKV2-23-201ENST00000518729 323 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 DUXAP2-201ENST00000519198 589 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN4P29074 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 AC104417.1-201ENST00000523974 751 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 AP000619.3-201ENST00000535634 1127 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN4P29074 AC092470.1-201ENST00000546187 132 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN4P29074 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN4P29074 MIR3690-201ENST00000580266 75 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN4P29074 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN4P29074 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN4P29074 AC113368.1-201ENST00000603736 382 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AC099785.1-201ENST00000605697 437 ntBASIC3.63□□□□□ -1.83
PTPN4P29074 AL513477.2-201ENST00000607858 568 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms