Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 Z95331.1-201ENST00000623075 23112 ntBASIC5.92□□□□□ -1.46
LIG1P18858 ZNF652P1-201ENST00000442420 1309 ntBASIC5.92□□□□□ -1.46
LIG1P18858 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.92□□□□□ -1.46
LIG1P18858 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIG1P18858 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
LIG1P18858 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG1P18858 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 USP9YP4-201ENST00000424401 1745 ntBASIC5.91□□□□□ -1.46
LIG1P18858 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.91□□□□□ -1.46
LIG1P18858 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG1P18858 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
LIG1P18858 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 PABPC1P6-201ENST00000445594 1829 ntBASIC5.91□□□□□ -1.46
LIG1P18858 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG1P18858 SNORA69-201ENST00000383895 132 ntBASIC5.91□□□□□ -1.46
LIG1P18858 RNA5SP339-201ENST00000390987 122 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AL122016.1-201ENST00000403365 367 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AL035079.1-201ENST00000405210 287 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG1P18858 AL031663.1-201ENST00000437445 219 ntBASIC5.91□□□□□ -1.46
LIG1P18858 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG1P18858 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 SBDSP1-204ENST00000453858 737 ntBASIC5.91□□□□□ -1.46
LIG1P18858 RPL31P50-201ENST00000471002 296 ntBASIC5.91□□□□□ -1.46
LIG1P18858 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIG1P18858 COPS8P2-201ENST00000473228 627 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 RNU6-488P-201ENST00000515918 99 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AC022616.6-201ENST00000520479 119 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.91□□□□□ -1.46
LIG1P18858 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 AC099489.2-201ENST00000574976 260 ntBASIC5.91□□□□□ -1.46
LIG1P18858 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 AC243960.4-201ENST00000600532 288 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AC078899.5-201ENST00000612475 178 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AC118658.2-201ENST00000618697 459 ntBASIC5.91□□□□□ -1.46
LIG1P18858 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 AP001642.1-201ENST00000624727 2117 ntBASIC5.91□□□□□ -1.46
LIG1P18858 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 MIR1302-1-201ENST00000637932 143 ntBASIC5.91□□□□□ -1.46
LIG1P18858 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG1P18858 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.91□□□□□ -1.46
LIG1P18858 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LIG1P18858 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG1P18858 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG1P18858 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIG1P18858 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
LIG1P18858 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.91□□□□□ -1.46
LIG1P18858 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
LIG1P18858 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
LIG1P18858 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIG1P18858 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIG1P18858 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIG1P18858 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
LIG1P18858 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIG1P18858 AC108467.2-201ENST00000617640 1597 ntBASIC5.9□□□□□ -1.46
LIG1P18858 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LIG1P18858 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
LIG1P18858 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIG1P18858 Y_RNA.67-201ENST00000362870 100 ntBASIC5.9□□□□□ -1.46
LIG1P18858 RNU6-1120P-201ENST00000362988 108 ntBASIC5.9□□□□□ -1.46
LIG1P18858 Y_RNA.138-201ENST00000363462 102 ntBASIC5.9□□□□□ -1.46
LIG1P18858 RNU6-730P-201ENST00000383954 104 ntBASIC5.9□□□□□ -1.46
LIG1P18858 SNORA67-201ENST00000384423 137 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AC013442.1-201ENST00000397347 228 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.9□□□□□ -1.46
LIG1P18858 TPMTP2-201ENST00000414372 726 ntBASIC5.9□□□□□ -1.46
LIG1P18858 RPL35AP12-201ENST00000425362 338 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AL353777.1-201ENST00000425552 326 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 AL606489.2-201ENST00000433886 234 ntBASIC5.9□□□□□ -1.46
LIG1P18858 RPS26P40-201ENST00000435209 294 ntBASIC5.9□□□□□ -1.46
LIG1P18858 GEMIN8P3-201ENST00000445417 720 ntBASIC5.9□□□□□ -1.46
LIG1P18858 RPL7P12-201ENST00000446719 750 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.9□□□□□ -1.46
LIG1P18858 HMGN3P1-201ENST00000453847 193 ntBASIC5.9□□□□□ -1.46
LIG1P18858 RPS27AP17-201ENST00000463344 455 ntBASIC5.9□□□□□ -1.46
LIG1P18858 RPL7P42-201ENST00000481005 679 ntBASIC5.9□□□□□ -1.46
LIG1P18858 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 AC008953.1-201ENST00000497334 318 ntBASIC5.9□□□□□ -1.46
LIG1P18858 TMEM251P1-201ENST00000503717 318 ntBASIC5.9□□□□□ -1.46
LIG1P18858 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.9□□□□□ -1.46
LIG1P18858 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.9□□□□□ -1.46
LIG1P18858 COX6CP8-201ENST00000522620 226 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms