Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ATF1P18846 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
ATF1P18846 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATF1P18846 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ATF1P18846 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF1P18846 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATF1P18846 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.74□□□□□ -1.97
ATF1P18846 MTND5P7-201ENST00000413558 1798 ntBASIC2.74□□□□□ -1.97
ATF1P18846 ZNF90P1-201ENST00000480493 1951 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF1P18846 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATF1P18846 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATF1P18846 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
ATF1P18846 AC234772.1-201ENST00000377927 937 ntBASIC2.74□□□□□ -1.97
ATF1P18846 Y_RNA.493-201ENST00000384422 102 ntBASIC2.74□□□□□ -1.97
ATF1P18846 TAF9BP2-201ENST00000400856 499 ntBASIC2.74□□□□□ -1.97
ATF1P18846 RPL36AP36-201ENST00000418616 301 ntBASIC2.74□□□□□ -1.97
ATF1P18846 OR1AA1P-201ENST00000419597 916 ntBASIC2.74□□□□□ -1.97
ATF1P18846 YPEL5P1-201ENST00000419731 367 ntBASIC2.74□□□□□ -1.97
ATF1P18846 RABEPKP1-201ENST00000440529 1026 ntBASIC2.74□□□□□ -1.97
ATF1P18846 RAB11AP1-201ENST00000442978 646 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF1P18846 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF1P18846 AC089999.1-201ENST00000460336 374 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AC091179.1-201ENST00000461606 579 ntBASIC2.74□□□□□ -1.97
ATF1P18846 RN7SL542P-201ENST00000467147 294 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AC015724.1-201ENST00000478577 156 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
ATF1P18846 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.74□□□□□ -1.97
ATF1P18846 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.74□□□□□ -1.97
ATF1P18846 MTCO2P32-201ENST00000514865 403 ntBASIC2.74□□□□□ -1.97
ATF1P18846 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.74□□□□□ -1.97
ATF1P18846 AC023632.4-201ENST00000517783 191 ntBASIC2.74□□□□□ -1.97
ATF1P18846 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF1P18846 AC083923.1-201ENST00000523708 376 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AC007458.1-201ENST00000542812 373 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.74□□□□□ -1.97
ATF1P18846 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.74□□□□□ -1.97
ATF1P18846 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.74□□□□□ -1.97
ATF1P18846 MAGOH2P-202ENST00000584384 429 ntBASIC2.74□□□□□ -1.97
ATF1P18846 AC006130.2-201ENST00000586202 326 ntBASIC2.74□□□□□ -1.97
ATF1P18846 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.74□□□□□ -1.97
ATF1P18846 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.74□□□□□ -1.97
ATF1P18846 uc_338.25-201ENST00000613756 156 ntBASIC2.74□□□□□ -1.97
ATF1P18846 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.74□□□□□ -1.97
ATF1P18846 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.74□□□□□ -1.97
ATF1P18846 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.74□□□□□ -1.97
ATF1P18846 AC084035.1-201ENST00000634543 607 ntBASIC2.74□□□□□ -1.97
ATF1P18846 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATF1P18846 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATF1P18846 AL049781.1-201ENST00000623195 3585 ntBASIC2.74□□□□□ -1.97
ATF1P18846 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATF1P18846 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATF1P18846 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATF1P18846 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATF1P18846 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.73□□□□□ -1.97
ATF1P18846 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ATF1P18846 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.73□□□□□ -1.97
ATF1P18846 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
ATF1P18846 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATF1P18846 AL121972.1-201ENST00000402023 252 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.73□□□□□ -1.97
ATF1P18846 MRPL50P2-201ENST00000416821 482 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.73□□□□□ -1.97
ATF1P18846 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.73□□□□□ -1.97
ATF1P18846 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.73□□□□□ -1.97
ATF1P18846 AC093151.1-201ENST00000427711 313 ntBASIC2.73□□□□□ -1.97
ATF1P18846 DPPA2P1-201ENST00000428060 556 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC091286.1-201ENST00000431233 461 ntBASIC2.73□□□□□ -1.97
ATF1P18846 HMGN2P31-201ENST00000432430 273 ntBASIC2.73□□□□□ -1.97
ATF1P18846 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.73□□□□□ -1.97
ATF1P18846 ELOCP23-201ENST00000452014 332 ntBASIC2.73□□□□□ -1.97
ATF1P18846 RPS15AP1-201ENST00000457423 391 ntBASIC2.73□□□□□ -1.97
ATF1P18846 RPL21P104-201ENST00000464143 478 ntBASIC2.73□□□□□ -1.97
ATF1P18846 HMGB1P25-201ENST00000468402 607 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC092593.2-201ENST00000513866 913 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.73□□□□□ -1.97
ATF1P18846 BNIP3P5-201ENST00000562290 498 ntBASIC2.73□□□□□ -1.97
ATF1P18846 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.73□□□□□ -1.97
ATF1P18846 AC005951.1-201ENST00000576706 485 ntBASIC2.73□□□□□ -1.97
ATF1P18846 MIR2682-201ENST00000580305 110 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC005412.1-201ENST00000580812 1049 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.73□□□□□ -1.97
ATF1P18846 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.73□□□□□ -1.97
ATF1P18846 AC125494.3-201ENST00000602759 455 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC004775.1-201ENST00000607389 753 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC092354.2-201ENST00000607786 514 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.73□□□□□ -1.97
ATF1P18846 AL390240.1-201ENST00000612950 384 ntBASIC2.73□□□□□ -1.97
ATF1P18846 STMN1P1-201ENST00000617809 440 ntBASIC2.73□□□□□ -1.97
ATF1P18846 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC090617.9-201ENST00000623751 147 ntBASIC2.73□□□□□ -1.97
ATF1P18846 AC006963.1-201ENST00000624003 1052 ntBASIC2.73□□□□□ -1.97
ATF1P18846 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.73□□□□□ -1.97
ATF1P18846 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATF1P18846 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.73□□□□□ -1.97
ATF1P18846 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ATF1P18846 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
ATF1P18846 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.73□□□□□ -1.97
ATF1P18846 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms