Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SSU72P6-201ENST00000532644 488 ntBASIC7.55□□□□□ -1.2
CD44P16070 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.55□□□□□ -1.2
CD44P16070 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 HMGN1P26-201ENST00000558737 303 ntBASIC7.55□□□□□ -1.2
CD44P16070 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 KLKP1-201ENST00000595979 403 ntBASIC7.55□□□□□ -1.2
CD44P16070 AL499605.1-201ENST00000604628 403 ntBASIC7.55□□□□□ -1.2
CD44P16070 uc_338.9-201ENST00000617424 182 ntBASIC7.55□□□□□ -1.2
CD44P16070 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.55□□□□□ -1.2
CD44P16070 AC006001.4-201ENST00000622243 395 ntBASIC7.55□□□□□ -1.2
CD44P16070 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CD44P16070 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CD44P16070 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CD44P16070 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.55□□□□□ -1.2
CD44P16070 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CD44P16070 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.55□□□□□ -1.2
CD44P16070 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CD44P16070 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.54□□□□□ -1.2
CD44P16070 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CD44P16070 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
CD44P16070 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CD44P16070 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.54□□□□□ -1.2
CD44P16070 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.54□□□□□ -1.2
CD44P16070 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CD44P16070 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.54□□□□□ -1.2
CD44P16070 RNA5SP65-201ENST00000363166 119 ntBASIC7.54□□□□□ -1.2
CD44P16070 RNU6-640P-201ENST00000363693 105 ntBASIC7.54□□□□□ -1.2
CD44P16070 Y_RNA.324-201ENST00000365165 102 ntBASIC7.54□□□□□ -1.2
CD44P16070 RNU6-813P-201ENST00000384691 107 ntBASIC7.54□□□□□ -1.2
CD44P16070 RPS4XP3-201ENST00000398541 413 ntBASIC7.54□□□□□ -1.2
CD44P16070 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 AC007365.2-201ENST00000428806 458 ntBASIC7.54□□□□□ -1.2
CD44P16070 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.54□□□□□ -1.2
CD44P16070 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC7.54□□□□□ -1.2
CD44P16070 RPS15AP7-201ENST00000439294 405 ntBASIC7.54□□□□□ -1.2
CD44P16070 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC7.54□□□□□ -1.2
CD44P16070 AC092421.1-201ENST00000448148 418 ntBASIC7.54□□□□□ -1.2
CD44P16070 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC7.54□□□□□ -1.2
CD44P16070 RPS20P10-201ENST00000451209 253 ntBASIC7.54□□□□□ -1.2
CD44P16070 TEX41-209ENST00000451478 452 ntTSL 2 BASIC7.54□□□□□ -1.2
CD44P16070 AC005726.1-201ENST00000494679 427 ntBASIC7.54□□□□□ -1.2
CD44P16070 SCARNA18.2-201ENST00000516882 84 ntBASIC7.54□□□□□ -1.2
CD44P16070 RNU2-60P-201ENST00000517290 128 ntBASIC7.54□□□□□ -1.2
CD44P16070 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.54□□□□□ -1.2
CD44P16070 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.54□□□□□ -1.2
CD44P16070 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.54□□□□□ -1.2
CD44P16070 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC7.54□□□□□ -1.2
CD44P16070 AC024614.1-201ENST00000577546 307 ntBASIC7.54□□□□□ -1.2
CD44P16070 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC7.54□□□□□ -1.2
CD44P16070 LARP7P3-201ENST00000579888 337 ntBASIC7.54□□□□□ -1.2
CD44P16070 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CD44P16070 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC7.54□□□□□ -1.2
CD44P16070 B3GNTL1P2-201ENST00000603673 288 ntBASIC7.54□□□□□ -1.2
CD44P16070 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.54□□□□□ -1.2
CD44P16070 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.54□□□□□ -1.2
CD44P16070 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CD44P16070 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CD44P16070 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.54□□□□□ -1.2
CD44P16070 AL359263.1-201ENST00000441188 2796 ntBASIC7.54□□□□□ -1.2
CD44P16070 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CD44P16070 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.53□□□□□ -1.2
CD44P16070 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.53□□□□□ -1.2
CD44P16070 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
CD44P16070 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CD44P16070 RNA5SP512-201ENST00000364550 120 ntBASIC7.53□□□□□ -1.2
CD44P16070 RNU6-49P-201ENST00000384256 107 ntBASIC7.53□□□□□ -1.2
CD44P16070 RNA5SP53-201ENST00000391299 120 ntBASIC7.53□□□□□ -1.2
CD44P16070 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CD44P16070 RN7SKP137-201ENST00000411074 307 ntBASIC7.53□□□□□ -1.2
CD44P16070 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.53□□□□□ -1.2
CD44P16070 Z82188.1-201ENST00000436709 154 ntBASIC7.53□□□□□ -1.2
CD44P16070 GOT2P2-201ENST00000450663 1251 ntBASIC7.53□□□□□ -1.2
CD44P16070 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC7.53□□□□□ -1.2
CD44P16070 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC7.53□□□□□ -1.2
CD44P16070 AC008481.1-201ENST00000463278 396 ntBASIC7.53□□□□□ -1.2
CD44P16070 TOMM22P6-201ENST00000465035 409 ntBASIC7.53□□□□□ -1.2
CD44P16070 pRNA.9-201ENST00000618609 89 ntBASIC7.53□□□□□ -1.2
CD44P16070 AL354798.1-201ENST00000622505 329 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms