Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ASNSP1-201ENST00000518311 1939 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 RNU6-169P-201ENST00000365336 107 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 RNU6-108P-201ENST00000365558 107 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 RPL31P1-201ENST00000398116 372 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC009804.1-201ENST00000400949 179 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.02□□□□□ -1.61
COL6A2P12110 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 RPL36AP36-201ENST00000418616 301 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 AC019097.1-201ENST00000424783 735 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 OR2B7P-201ENST00000429302 934 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 GTF2IP20-201ENST00000431663 360 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.02□□□□□ -1.61
COL6A2P12110 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.02□□□□□ -1.61
COL6A2P12110 SEPT14P3-201ENST00000439401 183 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 AL732372.2-207ENST00000445840 183 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AL031584.1-201ENST00000447169 754 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.02□□□□□ -1.61
COL6A2P12110 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.02□□□□□ -1.61
COL6A2P12110 SEPT14P2-201ENST00000453405 183 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 AP001992.1-205ENST00000462248 379 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 PPIAP21-201ENST00000464473 501 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 RN7SL177P-201ENST00000476596 299 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 RPL39P36-201ENST00000490784 156 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 RPS4XP18-201ENST00000495480 763 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC139783.2-201ENST00000504847 1145 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 SEPT14P4-201ENST00000513445 186 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.02□□□□□ -1.61
COL6A2P12110 RNA5SP249-201ENST00000516127 99 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 FO082796.1-201ENST00000523795 183 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.02□□□□□ -1.61
COL6A2P12110 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL6A2P12110 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 AC123904.3-201ENST00000547218 814 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 AC110743.1-201ENST00000584870 478 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.02□□□□□ -1.61
COL6A2P12110 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.02□□□□□ -1.61
COL6A2P12110 AC009318.4-201ENST00000620496 486 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC010338.1-201ENST00000621823 717 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC093648.1-201ENST00000623546 606 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 CYP4F35P-202ENST00000636121 390 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL6A2P12110 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.02□□□□□ -1.61
COL6A2P12110 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 CKAP2P1-201ENST00000555477 2049 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COL6A2P12110 AC093535.2-201ENST00000624769 2326 ntBASIC5.02□□□□□ -1.61
COL6A2P12110 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.02□□□□□ -1.61
COL6A2P12110 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
COL6A2P12110 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL6A2P12110 SCARNA15-201ENST00000607520 4325 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC235565.1-201ENST00000456962 1325 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AL122126.1-201ENST00000546905 1318 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL6A2P12110 AC015813.6-201ENST00000624409 5808 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL6A2P12110 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL6A2P12110 LINC00622-201ENST00000562811 1570 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC010928.1-201ENST00000592477 1447 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 Y_RNA.72-201ENST00000362894 103 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 RNU6-1097P-201ENST00000363586 107 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
COL6A2P12110 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
COL6A2P12110 SNORA20.2-201ENST00000383922 131 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 RNU6-456P-201ENST00000384493 107 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 MIR600-201ENST00000385007 98 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL6A2P12110 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.01□□□□□ -1.61
COL6A2P12110 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.01□□□□□ -1.61
COL6A2P12110 NUP35P2-201ENST00000416748 943 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 MRPL50P2-201ENST00000416821 482 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 EIF1P3-201ENST00000423841 334 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 CEACAMP1-201ENST00000434624 1035 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL6A2P12110 AC108734.1-201ENST00000439549 399 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AL450023.3-201ENST00000440592 271 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC093019.1-201ENST00000443135 252 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.01□□□□□ -1.61
COL6A2P12110 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC011225.1-201ENST00000457751 369 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms