Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP1P11387 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP1P11387 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TOP1P11387 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP1P11387 MIR5004-201ENST00000579078 107 ntBASIC3.8□□□□□ -1.8
TOP1P11387 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP1P11387 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.8□□□□□ -1.8
TOP1P11387 AL009028.1-201ENST00000604895 802 ntBASIC3.8□□□□□ -1.8
TOP1P11387 PLCE1P1-201ENST00000622094 305 ntBASIC3.8□□□□□ -1.8
TOP1P11387 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TOP1P11387 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.8□□□□□ -1.8
TOP1P11387 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TOP1P11387 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TOP1P11387 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TOP1P11387 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.8□□□□□ -1.8
TOP1P11387 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TOP1P11387 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TOP1P11387 ZNF37BP-203ENST00000452306 1352 ntBASIC3.79□□□□□ -1.8
TOP1P11387 MTND4P34-201ENST00000572715 1371 ntBASIC3.79□□□□□ -1.8
TOP1P11387 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TOP1P11387 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TOP1P11387 MIR591-201ENST00000385290 95 ntBASIC3.79□□□□□ -1.8
TOP1P11387 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TOP1P11387 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.79□□□□□ -1.8
TOP1P11387 GTF2IP23-201ENST00000423746 351 ntBASIC3.79□□□□□ -1.8
TOP1P11387 BX890604.2-201ENST00000427883 474 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.79□□□□□ -1.8
TOP1P11387 ETF1P3-201ENST00000430422 1160 ntBASIC3.79□□□□□ -1.8
TOP1P11387 ELOCP13-201ENST00000443934 329 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC068135.1-201ENST00000446164 246 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC125238.1-201ENST00000448842 249 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.79□□□□□ -1.8
TOP1P11387 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 AC021146.5-201ENST00000503544 545 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC008885.2-201ENST00000509506 930 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.79□□□□□ -1.8
TOP1P11387 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.79□□□□□ -1.8
TOP1P11387 AC104027.1-201ENST00000521887 300 ntBASIC3.79□□□□□ -1.8
TOP1P11387 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.79□□□□□ -1.8
TOP1P11387 AC006518.1-201ENST00000541449 943 ntBASIC3.79□□□□□ -1.8
TOP1P11387 MIR2682-201ENST00000580305 110 ntBASIC3.79□□□□□ -1.8
TOP1P11387 MIR3200-201ENST00000580767 85 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.79□□□□□ -1.8
TOP1P11387 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 AC012493.2-201ENST00000595083 291 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC006254.3-201ENST00000603353 884 ntBASIC3.79□□□□□ -1.8
TOP1P11387 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.79□□□□□ -1.8
TOP1P11387 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 MIR8057-201ENST00000620957 69 ntBASIC3.79□□□□□ -1.8
TOP1P11387 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
TOP1P11387 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TOP1P11387 AP001350.1-201ENST00000601906 1524 ntBASIC3.79□□□□□ -1.8
TOP1P11387 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
TOP1P11387 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TOP1P11387 AC009501.3-201ENST00000605001 1352 ntBASIC3.78□□□□□ -1.8
TOP1P11387 ZNF542P-204ENST00000482727 1305 ntBASIC3.78□□□□□ -1.8
TOP1P11387 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.78□□□□□ -1.8
TOP1P11387 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.78□□□□□ -1.8
TOP1P11387 RNA5SP383-201ENST00000362934 120 ntBASIC3.78□□□□□ -1.8
TOP1P11387 TAF9BP2-201ENST00000400856 499 ntBASIC3.78□□□□□ -1.8
TOP1P11387 RNA5SP293-201ENST00000410527 113 ntBASIC3.78□□□□□ -1.8
TOP1P11387 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.78□□□□□ -1.8
TOP1P11387 AIMP1P1-201ENST00000418670 937 ntBASIC3.78□□□□□ -1.8
TOP1P11387 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.78□□□□□ -1.8
TOP1P11387 AL353705.1-201ENST00000433468 480 ntBASIC3.78□□□□□ -1.8
TOP1P11387 MTCYBP31-201ENST00000438855 1122 ntBASIC3.78□□□□□ -1.8
TOP1P11387 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.78□□□□□ -1.8
TOP1P11387 XKRY2-201ENST00000442362 1093 ntBASIC3.78□□□□□ -1.8
TOP1P11387 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.78□□□□□ -1.8
TOP1P11387 RPL7P52-201ENST00000449200 742 ntBASIC3.78□□□□□ -1.8
TOP1P11387 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.78□□□□□ -1.8
TOP1P11387 AC092754.2-201ENST00000463506 460 ntBASIC3.78□□□□□ -1.8
TOP1P11387 SYPL1P1-201ENST00000473622 768 ntBASIC3.78□□□□□ -1.8
TOP1P11387 RPL23AP44-201ENST00000482216 473 ntBASIC3.78□□□□□ -1.8
TOP1P11387 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.78□□□□□ -1.8
TOP1P11387 TXNP6-201ENST00000510190 310 ntBASIC3.78□□□□□ -1.8
TOP1P11387 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.78□□□□□ -1.8
TOP1P11387 AP001207.1-201ENST00000524051 481 ntBASIC3.78□□□□□ -1.8
TOP1P11387 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.78□□□□□ -1.8
TOP1P11387 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.78□□□□□ -1.8
TOP1P11387 AC037471.2-201ENST00000564941 598 ntBASIC3.78□□□□□ -1.8
TOP1P11387 MTCYBP28-201ENST00000566728 1132 ntBASIC3.78□□□□□ -1.8
TOP1P11387 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.78□□□□□ -1.8
TOP1P11387 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.78□□□□□ -1.8
TOP1P11387 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TOP1P11387 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TOP1P11387 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
TOP1P11387 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.78□□□□□ -1.8
TOP1P11387 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.77□□□□□ -1.81
TOP1P11387 ELL2P4-201ENST00000446870 1376 ntBASIC3.77□□□□□ -1.81
TOP1P11387 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TOP1P11387 MTND4P8-201ENST00000514997 1362 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms