Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC006960.3-201ENST00000561845 705 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 BNIP3P26-201ENST00000600827 554 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 DEFB131E-202ENST00000602581 683 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AC121761.2-201ENST00000617300 689 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC6P09630 MAPK10-373ENST00000641983 6772 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
HOXC6P09630 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC6P09630 AC092104.1-201ENST00000497346 1441 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AC032011.1-201ENST00000611703 1549 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 ZNF962P-201ENST00000443465 3140 ntBASIC4.34□□□□□ -1.72
HOXC6P09630 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXC6P09630 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
HOXC6P09630 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.34□□□□□ -1.72
HOXC6P09630 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HOXC6P09630 AC097504.1-201ENST00000515103 2415 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC6P09630 AC087359.1-201ENST00000508335 1740 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 OR52B1P-201ENST00000316506 909 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 RNA5SP52-201ENST00000362448 134 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 RNU6-304P-201ENST00000364855 107 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC6P09630 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC6P09630 AC019155.1-201ENST00000382242 574 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 RNA5SP80-201ENST00000410475 111 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 RNU6-77P-201ENST00000410554 91 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 Y_RNA.619-201ENST00000410951 90 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 AC009263.1-201ENST00000441193 1239 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 RPL21P23-201ENST00000446654 460 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 RPS3AP46-201ENST00000448352 682 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC6P09630 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 SNORD105B-201ENST00000458770 79 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC104687.1-201ENST00000485829 412 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 NCOR1P1-202ENST00000486162 291 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 UBA52P3-201ENST00000491303 382 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC6P09630 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC6P09630 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 SCARNA13-201ENST00000516672 275 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 IGKV2-38-201ENST00000517443 247 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC6P09630 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 SULT1C2P2-201ENST00000562517 294 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 ACTR3BP3-201ENST00000565577 979 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC012435.1-202ENST00000568772 240 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC002400.1-201ENST00000569310 726 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC011260.1-201ENST00000578420 472 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HOXC6P09630 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 AL031985.2-201ENST00000600955 480 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 DUXAP11-201ENST00000603858 526 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC6P09630 AL451074.6-201ENST00000608512 729 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AC131235.4-201ENST00000609288 620 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC6P09630 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC6P09630 AC116618.1-201ENST00000634617 774 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC6P09630 AC244258.1-201ENST00000637553 1071 ntBASIC4.33□□□□□ -1.72
HOXC6P09630 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC6P09630 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC6P09630 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC6P09630 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC6P09630 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC6P09630 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
HOXC6P09630 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC6P09630 NSRP1P1-201ENST00000444067 1693 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HOXC6P09630 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC6P09630 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC6P09630 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC6P09630 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXC6P09630 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC6P09630 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC6P09630 RNU6-1339P-201ENST00000363574 91 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 MIR218-2-201ENST00000385006 110 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 MIR320B1-201ENST00000390209 79 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 RNU6-192P-201ENST00000391253 100 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC6P09630 RN7SKP222-201ENST00000410651 315 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 RNA5SP498-201ENST00000411342 120 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 AC007435.1-201ENST00000421086 415 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC6P09630 CYCSP4-201ENST00000429682 331 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 AC129850.1-201ENST00000436203 508 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC6P09630 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC6P09630 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC6P09630 COX6CP18-201ENST00000448769 222 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 CCDC75P1-201ENST00000469247 791 ntBASIC4.32□□□□□ -1.72
HOXC6P09630 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms