Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AGGF1P8-201ENST00000562979 1000 ntBASIC3.81□□□□□ -1.8
CD48P09326 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.81□□□□□ -1.8
CD48P09326 MIR5685-201ENST00000579080 79 ntBASIC3.81□□□□□ -1.8
CD48P09326 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.81□□□□□ -1.8
CD48P09326 MIR4999-201ENST00000585029 91 ntBASIC3.81□□□□□ -1.8
CD48P09326 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.81□□□□□ -1.8
CD48P09326 AC022916.3-201ENST00000592961 742 ntBASIC3.81□□□□□ -1.8
CD48P09326 AL031281.1-201ENST00000604049 488 ntBASIC3.81□□□□□ -1.8
CD48P09326 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CD48P09326 AP003973.1-201ENST00000604639 691 ntBASIC3.81□□□□□ -1.8
CD48P09326 AC106791.2-201ENST00000604680 391 ntBASIC3.81□□□□□ -1.8
CD48P09326 AC092653.1-201ENST00000608509 531 ntBASIC3.81□□□□□ -1.8
CD48P09326 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CD48P09326 AC008121.2-201ENST00000614647 523 ntBASIC3.81□□□□□ -1.8
CD48P09326 AC121761.2-201ENST00000617300 689 ntBASIC3.81□□□□□ -1.8
CD48P09326 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CD48P09326 PRO1804-201ENST00000623780 2050 ntBASIC3.81□□□□□ -1.8
CD48P09326 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CD48P09326 AL133412.1-201ENST00000380194 2992 ntBASIC3.81□□□□□ -1.8
CD48P09326 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
CD48P09326 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD48P09326 AP004289.2-201ENST00000444413 1457 ntBASIC3.8□□□□□ -1.8
CD48P09326 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.8□□□□□ -1.8
CD48P09326 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD48P09326 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CD48P09326 DBF4P1-201ENST00000412976 1892 ntBASIC3.8□□□□□ -1.8
CD48P09326 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CD48P09326 RN7SKP280-201ENST00000364196 304 ntBASIC3.8□□□□□ -1.8
CD48P09326 RPL32P23-201ENST00000397237 405 ntBASIC3.8□□□□□ -1.8
CD48P09326 GSTA8P-201ENST00000404253 637 ntBASIC3.8□□□□□ -1.8
CD48P09326 MIR1302-8-201ENST00000408342 128 ntBASIC3.8□□□□□ -1.8
CD48P09326 RNU6-757P-201ENST00000410334 100 ntBASIC3.8□□□□□ -1.8
CD48P09326 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.8□□□□□ -1.8
CD48P09326 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.8□□□□□ -1.8
CD48P09326 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 AL139421.1-201ENST00000423010 169 ntBASIC3.8□□□□□ -1.8
CD48P09326 BX119904.4-201ENST00000424402 301 ntBASIC3.8□□□□□ -1.8
CD48P09326 AL593851.1-201ENST00000426171 157 ntBASIC3.8□□□□□ -1.8
CD48P09326 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.8□□□□□ -1.8
CD48P09326 RPS6P12-201ENST00000432491 726 ntBASIC3.8□□□□□ -1.8
CD48P09326 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.8□□□□□ -1.8
CD48P09326 SEPT7P5-201ENST00000434048 306 ntBASIC3.8□□□□□ -1.8
CD48P09326 MTND3P1-201ENST00000441336 220 ntBASIC3.8□□□□□ -1.8
CD48P09326 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.8□□□□□ -1.8
CD48P09326 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 MTCYBP3-201ENST00000445588 1137 ntBASIC3.8□□□□□ -1.8
CD48P09326 TPMTP4-201ENST00000450749 678 ntBASIC3.8□□□□□ -1.8
CD48P09326 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.8□□□□□ -1.8
CD48P09326 NANOGP10-201ENST00000453325 895 ntBASIC3.8□□□□□ -1.8
CD48P09326 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.8□□□□□ -1.8
CD48P09326 RPS3AP43-201ENST00000479743 781 ntBASIC3.8□□□□□ -1.8
CD48P09326 ACTG1P13-201ENST00000486987 1043 ntBASIC3.8□□□□□ -1.8
CD48P09326 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.8□□□□□ -1.8
CD48P09326 AC005912.1-201ENST00000495392 255 ntBASIC3.8□□□□□ -1.8
CD48P09326 NPM1P41-201ENST00000512920 831 ntBASIC3.8□□□□□ -1.8
CD48P09326 AC008494.2-201ENST00000514544 370 ntBASIC3.8□□□□□ -1.8
CD48P09326 snoU109.6-201ENST00000516831 118 ntBASIC3.8□□□□□ -1.8
CD48P09326 RN7SKP283-201ENST00000517197 270 ntBASIC3.8□□□□□ -1.8
CD48P09326 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
CD48P09326 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CD48P09326 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.8□□□□□ -1.8
CD48P09326 ELOCP32-201ENST00000548625 324 ntBASIC3.8□□□□□ -1.8
CD48P09326 AP005136.1-201ENST00000579765 429 ntBASIC3.8□□□□□ -1.8
CD48P09326 VN1R82P-201ENST00000601481 356 ntBASIC3.8□□□□□ -1.8
CD48P09326 AL390838.2-201ENST00000602394 274 ntBASIC3.8□□□□□ -1.8
CD48P09326 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.8□□□□□ -1.8
CD48P09326 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.8□□□□□ -1.8
CD48P09326 AL022161.1-201ENST00000604390 213 ntBASIC3.8□□□□□ -1.8
CD48P09326 AL592221.1-201ENST00000605266 382 ntBASIC3.8□□□□□ -1.8
CD48P09326 AC245008.1-201ENST00000608123 476 ntBASIC3.8□□□□□ -1.8
CD48P09326 AC243654.2-201ENST00000612843 443 ntBASIC3.8□□□□□ -1.8
CD48P09326 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CD48P09326 AC139792.2-201ENST00000624218 587 ntBASIC3.8□□□□□ -1.8
CD48P09326 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD48P09326 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CD48P09326 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD48P09326 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD48P09326 AC021755.1-201ENST00000559747 1447 ntBASIC3.79□□□□□ -1.8
CD48P09326 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.79□□□□□ -1.8
CD48P09326 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.79□□□□□ -1.8
CD48P09326 ZNF542P-204ENST00000482727 1305 ntBASIC3.79□□□□□ -1.8
CD48P09326 DCAF13P3-201ENST00000561147 1334 ntBASIC3.79□□□□□ -1.8
CD48P09326 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.79□□□□□ -1.8
CD48P09326 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CD48P09326 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CD48P09326 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD48P09326 RNU6-839P-201ENST00000363347 108 ntBASIC3.79□□□□□ -1.8
CD48P09326 Y_RNA.126-201ENST00000363382 111 ntBASIC3.79□□□□□ -1.8
CD48P09326 RNU6-621P-201ENST00000364752 109 ntBASIC3.79□□□□□ -1.8
CD48P09326 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
CD48P09326 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD48P09326 SNORD116-9-201ENST00000384000 95 ntBASIC3.79□□□□□ -1.8
CD48P09326 SNORD116-3-201ENST00000384287 95 ntBASIC3.79□□□□□ -1.8
CD48P09326 SNORD116-7-201ENST00000384404 95 ntBASIC3.79□□□□□ -1.8
CD48P09326 SNORD116-5-201ENST00000384462 95 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms