Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-2O95096 RNA5SP246-201ENST00000458909 119 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AC109327.1-201ENST00000471666 403 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-2O95096 AC006517.1-201ENST00000480485 328 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AC099522.1-202ENST00000514718 367 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-2O95096 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-2O95096 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.88□□□□□ -1.79
NKX2-2O95096 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-2O95096 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-2O95096 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-2O95096 TVP23BP1-201ENST00000557500 617 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-2O95096 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-2O95096 AL353997.4-201ENST00000586196 166 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AC013444.2-201ENST00000603317 787 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 HMGN2P28-201ENST00000606102 262 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AC114781.5-201ENST00000615297 108 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-2O95096 AF246928.1-201ENST00000623768 87 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 AC011944.2-201ENST00000624440 683 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 MIR3653-201ENST00000625572 110 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NKX2-2O95096 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-2O95096 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-2O95096 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-2O95096 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NKX2-2O95096 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-2O95096 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-2O95096 AC010733.2-201ENST00000589496 5702 ntBASIC3.88□□□□□ -1.79
NKX2-2O95096 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-2O95096 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-2O95096 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NKX2-2O95096 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX2-2O95096 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-2O95096 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-2O95096 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-2O95096 RNU6-28P-201ENST00000362378 107 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 RNA5SP388-201ENST00000362584 119 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NKX2-2O95096 RPL23AP26-201ENST00000412728 464 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AIMP1P1-201ENST00000418670 937 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC244098.2-201ENST00000422068 99 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 RPL18P10-201ENST00000425606 538 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-2O95096 BTF3P10-201ENST00000433415 495 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 SDCBPP1-201ENST00000440192 890 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-2O95096 HMGN2P21-201ENST00000447764 270 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 RPS3AP43-201ENST00000479743 781 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC091167.1-201ENST00000492017 396 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC093534.1-201ENST00000504977 132 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AC093677.1-201ENST00000514414 678 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 Vault.1-201ENST00000516474 102 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AC022882.1-201ENST00000532142 501 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC068587.4-201ENST00000533893 186 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.87□□□□□ -1.79
NKX2-2O95096 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AC024224.1-201ENST00000538284 609 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX2-2O95096 AC141257.3-201ENST00000572906 215 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC011260.1-201ENST00000578420 472 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 MIR4284-201ENST00000578924 81 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX2-2O95096 BBIP1P1-201ENST00000602999 279 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AL365503.1-201ENST00000605247 905 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 BX323046.1-201ENST00000610145 535 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 MIR7844-201ENST00000616161 122 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC009039.2-201ENST00000624524 529 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AP005264.7-201ENST00000625003 745 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 AC127502.3-201ENST00000636170 1206 ntBASIC3.87□□□□□ -1.79
NKX2-2O95096 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-2O95096 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX2-2O95096 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX2-2O95096 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-2O95096 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NKX2-2O95096 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-2O95096 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NKX2-2O95096 RNU6-660P-201ENST00000364566 109 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 SNORD116-2-201ENST00000384274 95 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 SNORA37-201ENST00000384504 129 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 SNORD116-6-201ENST00000384711 96 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 AL583834.1-201ENST00000406943 343 ntBASIC3.86□□□□□ -1.79
NKX2-2O95096 RNU4-78P-201ENST00000410940 126 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms