Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC068135.1-201ENST00000446164 246 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 AL590399.6-201ENST00000446396 307 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 AC073522.1-201ENST00000483312 377 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 RPL7P38-201ENST00000488396 739 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 AP002812.1-201ENST00000495378 474 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.12□□□□□ -1.91
SEMA3DO95025 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
SEMA3DO95025 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.12□□□□□ -1.91
SEMA3DO95025 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.12□□□□□ -1.91
SEMA3DO95025 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.12□□□□□ -1.91
SEMA3DO95025 AC034268.2-201ENST00000571784 482 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 YWHAQP7-201ENST00000603536 658 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 AC006133.1-201ENST00000617106 264 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEMA3DO95025 AP006248.3-201ENST00000623580 594 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 FAM157B-203ENST00000639350 358 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.12□□□□□ -1.91
SEMA3DO95025 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEMA3DO95025 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SEMA3DO95025 AC104446.1-201ENST00000613728 1321 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SEMA3DO95025 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.12□□□□□ -1.91
SEMA3DO95025 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SEMA3DO95025 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
SEMA3DO95025 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SEMA3DO95025 API5P2-201ENST00000397055 1498 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SEMA3DO95025 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SEMA3DO95025 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEMA3DO95025 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEMA3DO95025 U3.11-201ENST00000364476 212 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SEMA3DO95025 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 OR6K3-202ENST00000368146 996 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 MIR490-201ENST00000384865 128 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SEMA3DO95025 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AL138880.1-201ENST00000405824 642 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 RNU2-21P-201ENST00000410368 188 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 RPL21P66-201ENST00000426566 466 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 TRIM60P18-201ENST00000441518 828 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC104689.1-201ENST00000473356 768 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 RN7SL293P-201ENST00000481765 281 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC108078.3-201ENST00000502633 489 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC133963.2-201ENST00000513686 578 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 SNORA67.7-201ENST00000516664 135 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 SNORD59.2-201ENST00000516873 68 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC074029.1-201ENST00000552531 1044 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC012254.4-201ENST00000588843 273 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC245389.1-201ENST00000605141 529 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 HMGN2P28-201ENST00000606102 262 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 AP001033.2-201ENST00000609701 1003 ntBASIC3.11□□□□□ -1.91
SEMA3DO95025 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.11□□□□□ -1.91
SEMA3DO95025 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
SEMA3DO95025 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SEMA3DO95025 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SEMA3DO95025 MTND5P11-201ENST00000511037 1812 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEMA3DO95025 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.1□□□□□ -1.91
SEMA3DO95025 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEMA3DO95025 RNU1-85P-201ENST00000364127 164 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SEMA3DO95025 RPS3AP26-201ENST00000398259 784 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 HMGN1P24-201ENST00000412282 298 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 HMGB3P31-201ENST00000413333 595 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.1□□□□□ -1.91
SEMA3DO95025 OR1AA1P-201ENST00000419597 916 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.1□□□□□ -1.91
SEMA3DO95025 AL159987.2-201ENST00000432754 307 ntBASIC3.1□□□□□ -1.91
SEMA3DO95025 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.1□□□□□ -1.91
SEMA3DO95025 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms