Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LDB2O43679 RNU2-28P-201ENST00000410457 189 ntBASIC4.11□□□□□ -1.75
LDB2O43679 RN7SKP33-201ENST00000410942 340 ntBASIC4.11□□□□□ -1.75
LDB2O43679 RN7SKP142-201ENST00000411236 328 ntBASIC4.11□□□□□ -1.75
LDB2O43679 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 AC093698.1-201ENST00000423843 571 ntBASIC4.11□□□□□ -1.75
LDB2O43679 COX6CP15-201ENST00000426313 211 ntBASIC4.11□□□□□ -1.75
LDB2O43679 USP9YP28-201ENST00000435142 589 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LDB2O43679 RPL7P19-201ENST00000469948 618 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AC116337.2-201ENST00000477662 156 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 RNA5SP154-201ENST00000516193 111 ntBASIC4.11□□□□□ -1.75
LDB2O43679 MIR2116-201ENST00000517221 80 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AC060788.1-201ENST00000521318 469 ntBASIC4.11□□□□□ -1.75
LDB2O43679 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.11□□□□□ -1.75
LDB2O43679 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.11□□□□□ -1.75
LDB2O43679 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.11□□□□□ -1.75
LDB2O43679 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.11□□□□□ -1.75
LDB2O43679 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.11□□□□□ -1.75
LDB2O43679 EIF5A2P1-201ENST00000564027 460 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AC006362.1-201ENST00000567392 174 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.11□□□□□ -1.75
LDB2O43679 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.11□□□□□ -1.75
LDB2O43679 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.11□□□□□ -1.75
LDB2O43679 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.11□□□□□ -1.75
LDB2O43679 AC004987.4-201ENST00000603383 338 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AC010857.1-201ENST00000606398 594 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AL031775.1-201ENST00000607014 887 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AL391497.1-201ENST00000608671 547 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AP001521.1-201ENST00000609150 300 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AP000254.1-201ENST00000609934 520 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AC018816.2-201ENST00000621460 353 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AC079228.1-201ENST00000624774 1049 ntBASIC4.11□□□□□ -1.75
LDB2O43679 AL392088.2-201ENST00000637607 285 ntBASIC4.11□□□□□ -1.75
LDB2O43679 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
LDB2O43679 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
LDB2O43679 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.11□□□□□ -1.75
LDB2O43679 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.11□□□□□ -1.75
LDB2O43679 AL049555.1-201ENST00000562834 1933 ntBASIC4.11□□□□□ -1.75
LDB2O43679 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LDB2O43679 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.1□□□□□ -1.75
LDB2O43679 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.1□□□□□ -1.75
LDB2O43679 AC097504.1-201ENST00000515103 2415 ntBASIC4.1□□□□□ -1.75
LDB2O43679 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LDB2O43679 SNRPEP3-201ENST00000338402 276 ntBASIC4.1□□□□□ -1.75
LDB2O43679 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 Y_RNA.126-201ENST00000363382 111 ntBASIC4.1□□□□□ -1.75
LDB2O43679 RNU6-660P-201ENST00000364566 109 ntBASIC4.1□□□□□ -1.75
LDB2O43679 RNU4-75P-201ENST00000364621 146 ntBASIC4.1□□□□□ -1.75
LDB2O43679 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LDB2O43679 AC073264.1-201ENST00000411508 416 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AL160275.2-201ENST00000412010 394 ntBASIC4.1□□□□□ -1.75
LDB2O43679 MTCO3P41-201ENST00000414801 328 ntBASIC4.1□□□□□ -1.75
LDB2O43679 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 AL953862.1-201ENST00000423016 168 ntBASIC4.1□□□□□ -1.75
LDB2O43679 SDCBPP2-201ENST00000424643 885 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AL031736.2-201ENST00000426573 787 ntBASIC4.1□□□□□ -1.75
LDB2O43679 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LDB2O43679 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 ELOCP18-201ENST00000434209 337 ntBASIC4.1□□□□□ -1.75
LDB2O43679 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 YWHAZP8-201ENST00000436935 731 ntBASIC4.1□□□□□ -1.75
LDB2O43679 MTCO1P19-201ENST00000443487 500 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.1□□□□□ -1.75
LDB2O43679 MTCO1P48-201ENST00000448024 1096 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 ARPC3P2-201ENST00000457786 533 ntBASIC4.1□□□□□ -1.75
LDB2O43679 RNU6-956P-201ENST00000458868 103 ntBASIC4.1□□□□□ -1.75
LDB2O43679 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 RN7SL604P-201ENST00000492589 296 ntBASIC4.1□□□□□ -1.75
LDB2O43679 OR4G11P-201ENST00000492842 939 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.1□□□□□ -1.75
LDB2O43679 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 IGKV2-38-201ENST00000517443 247 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.1□□□□□ -1.75
LDB2O43679 DEFB131D-201ENST00000526803 184 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.1□□□□□ -1.75
LDB2O43679 AP000790.1-201ENST00000528891 737 ntBASIC4.1□□□□□ -1.75
LDB2O43679 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.1□□□□□ -1.75
LDB2O43679 AC090502.2-201ENST00000549267 280 ntBASIC4.1□□□□□ -1.75
LDB2O43679 CYCSP2-201ENST00000558168 301 ntBASIC4.1□□□□□ -1.75
LDB2O43679 SULT1C2P1-202ENST00000562418 459 ntBASIC4.1□□□□□ -1.75
LDB2O43679 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.1□□□□□ -1.75
LDB2O43679 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.1□□□□□ -1.75
LDB2O43679 HNRNPCP4-201ENST00000571636 900 ntBASIC4.1□□□□□ -1.75
LDB2O43679 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.1□□□□□ -1.75
LDB2O43679 MIR3160-1-201ENST00000577972 85 ntBASIC4.1□□□□□ -1.75
LDB2O43679 AC012417.1-201ENST00000582307 1039 ntBASIC4.1□□□□□ -1.75
LDB2O43679 MIR5684-201ENST00000585074 65 ntBASIC4.1□□□□□ -1.75
LDB2O43679 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms