Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.93□□□□□ -1.94
SGCEO43556 AC024595.1-201ENST00000623088 387 ntBASIC2.93□□□□□ -1.94
SGCEO43556 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SGCEO43556 AC127502.3-201ENST00000636170 1206 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AC017104.5-201ENST00000637647 639 ntBASIC2.93□□□□□ -1.94
SGCEO43556 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SGCEO43556 ZNF734P-201ENST00000419494 1534 ntBASIC2.93□□□□□ -1.94
SGCEO43556 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.92□□□□□ -1.94
SGCEO43556 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SGCEO43556 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
SGCEO43556 SNORD56.3-201ENST00000363507 71 ntBASIC2.92□□□□□ -1.94
SGCEO43556 RPL31P1-201ENST00000398116 372 ntBASIC2.92□□□□□ -1.94
SGCEO43556 SSXP10-201ENST00000402595 565 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AL591034.1-201ENST00000407447 340 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.92□□□□□ -1.94
SGCEO43556 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SGCEO43556 BMS1P22-201ENST00000414726 313 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AC245052.5-201ENST00000416320 649 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.92□□□□□ -1.94
SGCEO43556 SETP8-201ENST00000435341 628 ntBASIC2.92□□□□□ -1.94
SGCEO43556 UBE2V1P5-201ENST00000440070 405 ntBASIC2.92□□□□□ -1.94
SGCEO43556 Z95327.1-201ENST00000446082 482 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AL034418.1-201ENST00000448675 860 ntBASIC2.92□□□□□ -1.94
SGCEO43556 RPL26P28-201ENST00000451325 435 ntBASIC2.92□□□□□ -1.94
SGCEO43556 HMGN1P18-201ENST00000457642 277 ntBASIC2.92□□□□□ -1.94
SGCEO43556 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.92□□□□□ -1.94
SGCEO43556 AC006499.5-201ENST00000505037 514 ntBASIC2.92□□□□□ -1.94
SGCEO43556 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SGCEO43556 AC008565.1-201ENST00000509046 885 ntBASIC2.92□□□□□ -1.94
SGCEO43556 RNU6-488P-201ENST00000515918 99 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SGCEO43556 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.92□□□□□ -1.94
SGCEO43556 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.92□□□□□ -1.94
SGCEO43556 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.92□□□□□ -1.94
SGCEO43556 AC027104.1-201ENST00000563702 681 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.92□□□□□ -1.94
SGCEO43556 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.92□□□□□ -1.94
SGCEO43556 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.92□□□□□ -1.94
SGCEO43556 AP001029.3-201ENST00000588063 596 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AC113368.1-201ENST00000603736 382 ntBASIC2.92□□□□□ -1.94
SGCEO43556 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.92□□□□□ -1.94
SGCEO43556 AL355365.1-201ENST00000616480 294 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AC025016.1-201ENST00000616746 682 ntBASIC2.92□□□□□ -1.94
SGCEO43556 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.92□□□□□ -1.94
SGCEO43556 AC083865.1-201ENST00000636634 831 ntBASIC2.92□□□□□ -1.94
SGCEO43556 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.92□□□□□ -1.94
SGCEO43556 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SGCEO43556 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.91□□□□□ -1.94
SGCEO43556 AC009501.3-201ENST00000605001 1352 ntBASIC2.91□□□□□ -1.94
SGCEO43556 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SGCEO43556 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
SGCEO43556 RNU6-40P-201ENST00000384254 107 ntBASIC2.91□□□□□ -1.94
SGCEO43556 TAF9BP2-201ENST00000400856 499 ntBASIC2.91□□□□□ -1.94
SGCEO43556 MIR887-201ENST00000401258 79 ntBASIC2.91□□□□□ -1.94
SGCEO43556 AL354719.1-201ENST00000406535 843 ntBASIC2.91□□□□□ -1.94
SGCEO43556 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.91□□□□□ -1.94
SGCEO43556 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.91□□□□□ -1.94
SGCEO43556 RPL36P19-201ENST00000430744 301 ntBASIC2.91□□□□□ -1.94
SGCEO43556 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.91□□□□□ -1.94
SGCEO43556 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.91□□□□□ -1.94
SGCEO43556 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.91□□□□□ -1.94
SGCEO43556 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.91□□□□□ -1.94
SGCEO43556 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.91□□□□□ -1.94
SGCEO43556 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.91□□□□□ -1.94
SGCEO43556 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.91□□□□□ -1.94
SGCEO43556 AC108043.1-201ENST00000512696 574 ntBASIC2.91□□□□□ -1.94
SGCEO43556 RN7SKP157-201ENST00000516174 282 ntBASIC2.91□□□□□ -1.94
SGCEO43556 SNORA31.20-201ENST00000517111 133 ntBASIC2.91□□□□□ -1.94
SGCEO43556 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.91□□□□□ -1.94
SGCEO43556 AC019227.1-201ENST00000526902 510 ntBASIC2.91□□□□□ -1.94
SGCEO43556 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.91□□□□□ -1.94
SGCEO43556 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.91□□□□□ -1.94
SGCEO43556 AC012414.2-201ENST00000559474 187 ntBASIC2.91□□□□□ -1.94
SGCEO43556 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.91□□□□□ -1.94
SGCEO43556 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.91□□□□□ -1.94
SGCEO43556 AC010653.1-201ENST00000571108 881 ntBASIC2.91□□□□□ -1.94
SGCEO43556 MIR3158-1-201ENST00000583596 81 ntBASIC2.91□□□□□ -1.94
SGCEO43556 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
SGCEO43556 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.91□□□□□ -1.94
SGCEO43556 AC008687.2-201ENST00000597865 520 ntBASIC2.91□□□□□ -1.94
SGCEO43556 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.91□□□□□ -1.94
SGCEO43556 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.91□□□□□ -1.94
SGCEO43556 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SGCEO43556 AC084035.1-201ENST00000634543 607 ntBASIC2.91□□□□□ -1.94
SGCEO43556 AC068620.4-201ENST00000636730 1182 ntBASIC2.91□□□□□ -1.94
SGCEO43556 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.91□□□□□ -1.94
SGCEO43556 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SGCEO43556 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SGCEO43556 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SGCEO43556 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SGCEO43556 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SGCEO43556 RNU6-374P-201ENST00000364146 108 ntBASIC2.9□□□□□ -1.95
SGCEO43556 RNU1-101P-201ENST00000391171 127 ntBASIC2.9□□□□□ -1.95
SGCEO43556 SNORA26.7-201ENST00000391288 122 ntBASIC2.9□□□□□ -1.95
SGCEO43556 RPS3AP26-201ENST00000398259 784 ntBASIC2.9□□□□□ -1.95
SGCEO43556 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.9□□□□□ -1.95
SGCEO43556 HSFY4P-201ENST00000415994 1181 ntBASIC2.9□□□□□ -1.95
SGCEO43556 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SGCEO43556 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms