Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC108479.2-201ENST00000617314 601 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.55□□□□□ -1.68
PHGDHO43175 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PHGDHO43175 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
PHGDHO43175 Z73965.1-201ENST00000623412 2297 ntBASIC4.55□□□□□ -1.68
PHGDHO43175 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PHGDHO43175 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.54□□□□□ -1.68
PHGDHO43175 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.54□□□□□ -1.68
PHGDHO43175 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
PHGDHO43175 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
PHGDHO43175 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 RNA5SP56-201ENST00000410277 118 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 RN7SKP267-201ENST00000410381 285 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 Y_RNA.608-201ENST00000410647 95 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.54□□□□□ -1.68
PHGDHO43175 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.54□□□□□ -1.68
PHGDHO43175 RPS12P23-201ENST00000419579 400 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.54□□□□□ -1.68
PHGDHO43175 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.54□□□□□ -1.68
PHGDHO43175 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.54□□□□□ -1.68
PHGDHO43175 MTND1P34-201ENST00000438556 671 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.54□□□□□ -1.68
PHGDHO43175 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.54□□□□□ -1.68
PHGDHO43175 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.54□□□□□ -1.68
PHGDHO43175 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.54□□□□□ -1.68
PHGDHO43175 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 PPIAP3-201ENST00000450588 505 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC053481.1-201ENST00000467217 306 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC104763.1-201ENST00000475274 360 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 RNU6-1003P-201ENST00000517099 105 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.54□□□□□ -1.68
PHGDHO43175 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.54□□□□□ -1.68
PHGDHO43175 EEF1B2P4-201ENST00000551398 348 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AL110118.1-201ENST00000553543 400 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 ZNF519P3-201ENST00000557158 1032 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC051619.2-201ENST00000559063 397 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 MIR4528-201ENST00000577763 90 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 MIR3667-201ENST00000581025 74 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 SLC25A36P1-201ENST00000590111 465 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 DEFB131E-202ENST00000602581 683 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AL136363.2-201ENST00000604173 851 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC091979.2-201ENST00000607514 214 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC138749.5-201ENST00000611461 208 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC131902.3-201ENST00000611767 581 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 MIR7155-201ENST00000615925 56 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC116165.2-201ENST00000616705 206 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC131238.1-201ENST00000617135 328 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AL139089.1-201ENST00000620372 975 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AC068870.2-201ENST00000620635 389 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 AL359740.1-201ENST00000624340 592 ntBASIC4.54□□□□□ -1.68
PHGDHO43175 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.54□□□□□ -1.68
PHGDHO43175 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PHGDHO43175 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.54□□□□□ -1.68
PHGDHO43175 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PHGDHO43175 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PHGDHO43175 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 MTND5P29-201ENST00000458676 1807 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 AC087190.4-201ENST00000574616 8334 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PHGDHO43175 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PHGDHO43175 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 SNORD51-201ENST00000384320 80 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 RNU6-297P-201ENST00000384636 107 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 RNU6-821P-201ENST00000390995 107 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 RPS20P2-201ENST00000402520 389 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 Y_RNA.599-201ENST00000410489 109 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 RNU4-78P-201ENST00000410940 126 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.53□□□□□ -1.68
PHGDHO43175 VDAC1P9-201ENST00000412766 841 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.53□□□□□ -1.68
PHGDHO43175 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 AC245052.5-201ENST00000416320 649 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AC005154.2-201ENST00000438110 379 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.53□□□□□ -1.68
PHGDHO43175 AC099563.1-201ENST00000456086 418 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 RN7SL329P-201ENST00000467740 299 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 RN7SL41P-201ENST00000476144 297 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.53□□□□□ -1.68
PHGDHO43175 LARP1BP2-201ENST00000486594 519 ntBASIC4.53□□□□□ -1.68
PHGDHO43175 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.53□□□□□ -1.68
PHGDHO43175 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.53□□□□□ -1.68
PHGDHO43175 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.53□□□□□ -1.68
PHGDHO43175 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.53□□□□□ -1.68
PHGDHO43175 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.53□□□□□ -1.68
PHGDHO43175 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PHGDHO43175 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.53□□□□□ -1.68
PHGDHO43175 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.53□□□□□ -1.68
PHGDHO43175 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.53□□□□□ -1.68
PHGDHO43175 HMGB2P1-201ENST00000591146 634 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms